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The Genotypes of α-Thalassemia and Genotypes Frequencies of α-Thalassemia in Hatay

Year 2014, , 233 - 236, 01.09.2014
https://doi.org/10.5505/abantmedj.2014.49358

Abstract

OBJECTIVE: α-thalassemia, characterized by a decreased or lack of synthesis of α-globin chains of hemoglobin, is very common disease in the world. α-globin gene is located at the short arm of chromosome 16 16p 13.3 and contains mutations including deletions and single point mutations α3.7, αMED, α COD8 -AA , 1-5nt IVS α2, α2 poly A1 mutations . In this study, we aimed to determine the frequency of α-thalassemia gene mutations in Hatay region. METHODS: To do so, study population who referred to Medical Genetic Department of Mustafa Kemal University, Medical School for either detection of α-thalassemia gene mutations between 2012-2013, 407 individuals with α-thalassemia gene mutations were includud to the study. Molecular screening of the α-globin gene was carried out by an α-globin strip assay Vienna Lab Diagnostics, Vienna, Austria which is based on multiplex PCR Polymerase Chain Reaction for specific amplification.RESULTS: According to this, it has found that the frequencies of α3.7, αMED, α COD8 -AA , 1-5nt IVS α2, α2 poly A1 mutations are 29.48%, 5.16%, 0.25%, 0.25%, 0.25%, respectively.CONCLUSION: Consequently, the frequency of mutation affects ethnic backround and geographic locations. Hatay region also has a unique origin and so, the frequencies of α-thalassemia gene mutations has unique characteristic.

References

  • Harteveld Cornelis L. and Higgs Douglas R. α- thalassaemia. Orhpanet J of Rare Diseases. ;5(13):1-21.
  • Higgs DR. The molecular basis of α-thalassaemia. Cold Spring Harb Perspect Med 2013; doi: 1101/cshperspect.a011718.
  • Vichinsky EP. Clinical manifestations of α- thalassaemia. Cold Spring Harb Perspect Med 2013; doi: 10.1101/cshperspect.a011742.
  • Higgs DR, Vickers MA, Wilkie AO, Pretorius IM, Jarman AP, Weatherall DJ. A review of the molecu- lar genetics of the human α-globin gene cluster. Blood 1989;73:1081-1104.
  • Lal A, Goldrich ML, Haines DA, Azimi M, Singer ST, Vichinsky EP. Heterogeneity of hemoglobin H disea- se in childhood. N Engl J Med 2011;364(8):710-8.
  • Flint J, Harding RM, Clegg JB, Boyce AJ. Why are some genetic diseases common? Distinguishing selection from other processes by molecular analy- sis of globin gene variants. Hum Genet 1993;91:91
  • Flint J, Harding RM, Boyce AJ, Clegg JB. The popu- lation genetics of the haemoglobinopathies. Baillie- res Clin Haematol 1998;11:1-51.
  • Celik MM, Gunesacar R, Oktay G, Duran GG, Kaya H. Spectrum of α-thalassemia mutations including first observation of - -(FIL) deletion in Hatay Provin- ce, Turkey. Blood Cells Mol Dis 2013;51(1):27-30.
  • Cürük MA. Hb H (Beta4) Disease in Cukurova, Southern Turkey. Hemoglobin 2007;31:265-271.
  • Oner C, Gürgey A, Oner R, Balkan H, Gümrük F, Baysal E, Altay C. The molecular basis of Hb H disea- se in Turkey. Hemoglobin 1997;21:41-51.
  • Sutcu R, Aylak F, Kocak H, Sipahi T, Vural H, Delibas N. The investigation of distribution of here- ditary alpha-thalassemia mutations in Isparta reser- voir. Eur J Basic Med Sci 2011;1:28-32.
  • Siala H, Ouali F, Messaoud T, Bibi A, Fattoum S. α-Thalassaemia in Tunisia: some epidemiological and molecular data. J Genet 2008;87:229-234.
  • El-Kalla S, Baysal E. Alpha-thalassemia in the United Arab Emirates, Acta Haematol 1998;100:49
  • Hadavi V, Jafroodi M, Hafezi-Nejad N, Mogha- dam SD, Eskandari F, Tarashohi S, Pourfahim H, Oberkanins C, Law HY, Najmabadi H. Alpha- thalassemia mutations in Gilan Province, North Iran. Hemoglobin 2009;33(3):235-41.
  • Abu Ghoush MW. Subtypes of alpha thalassemia diagnosed at a Medical Center in Jordan.TAF Prev Med Bull 2008;7:373-376.
  • Oron-Karni V, Filon D, Shifrin Y, Fried E, Pogre- bijsky G, Oppenheim A, Rund D. Diversity of alpha- globin mutations and clinical presentation of a- thalassemia in Israel. Am J Hematol 2000;65:196-203.
  • Hassan SM, Hamza N, Jaffer Al-Lawatiya F, Jaffer Mohammed A, Harteveld CL, Rajab A, Giordano PC. Extended molecular spectrum of beta- and alphat- halassemia in Oman. Hemoglobin 2010;34:127-134.
  • Hellani A, Fadel E, El-Sadadi S, El-Sweilam H, El- Dawood A, Abu-Amero KK. Molecular spectrum of alpha-thalassemia mutations in microcytic hypoch- romic anemia patients from Saudi Arabia. Genet Test Mol Biomarkers 2009;13:219-221.
  • Kyriacou K, Kyrri K, Kalogirou E, Vasiliades P, Angastiniotis M, Ioannou PA, Kleanthous M. Hb Bart's levels in cord blood and alpha-thalassemia mutations in Cyprus. Hemoglobin 2000;24:171-180.
  • Novelletto A, Hafez M, Di Rienzo A, Felicetti L, Deidda G, el Morsi Z, al-Tonbary Y, el-Ziny M, Abd- el-Gelil N, Terrenato L. Frequency and molecular types of deletional alpha-thalassemia in Egypt. Hum Genet 1989;81(3):211-3.
  • Di Bella C, Salpietro C, La Rosa M, Cuppari C, Piraino B, Cutri MR, Rigoli L. Identification of alpha- thalassemia mutations in subjects from Eastern Sicily (Italy) with abnormal hematological indices and normal Hb A2. Ann Hematol 2006;85:829-831.
  • Villegas A, Ropero P, González FA, Anguita E, Espinós D. The thalassemia syndromes: molecular characterization in the Spanish population. Hemog- lobin 2001;25:273-283.
  • Harteveld KL, Losekoot M, Heister AJ, van der Wielen M, Giordano PC, Bernini LF. Alpha- thalassemia in The Netherlands: a heterogeneous spectrum of both deletions and point mutations. Hum Genet 1997;100:465-471.
  • Souza AE, Cardoso GL, Takanashi SY, Guerreiron JF. Alpha-thalassemia (3.7 kb deletion) in a population from the Brazilian Amazon region: Santarém, Pará State. Genet Mol Res ;8:477-481
  • Baysal E, Kleanthous M, Bozkurt G, Kyrri A, Kalo- girou E, Angastiniotis M, Ioannou P, Huisman TH. Alpha-thalassaemia in the population of Cyprus. Br J Haematol 1995;89:496-499.

Hataydaki α-Talasemi Genotipleri ve α-Talasemi Genotip Frekansı

Year 2014, , 233 - 236, 01.09.2014
https://doi.org/10.5505/abantmedj.2014.49358

Abstract

AMAÇ: Dünyada çok yaygın olarak görülen α-talasemi, hemoglobindeki α-globin zincirinin eksikliği ya da azalması ile karakterize olan bir hastalıktır. α-globin geni 16. kromozomun kısa kolu üzerinde 16p 13.3 bulunur ve delesyon ve tek nokta mutasyonu şeklinde α3.7, αMED, α COD8 -AA , α2 IVS 1-5nt, α2 poly A1 mutasyonları mutasyonlar içerir. Biz bu çalışmada Hatay bölgesindeki α-talasemi gen mutasyonlarının frekansını belirlemeyi amaçladık. YÖNTEMLER: Bu amaçla, 2012-2013 tarihleri arasında Mustafa Kemal Üniversitesi, Tıp Fakültesi, Tıbbi Genetik AD’a gelen α-talasemili 407 hasta tarandı. α-globin geninin moleküler analizi multipleks PCR Polimeraz Zincir Reaksiyonu temelli α-globin Strip Assay yöntemi Vienna Lab Diagnostics, Vienna, Austria ile gerçekleştirildi. BULGULAR: Buna göre, bölgemizdeki α3.7, αMED, α COD8 -AA , α2 IVS 1-5nt, α2 poly A1mutasyonlarının frekansları sırası ile %29.48, %5.16, %0.25, %0.25, %0.25 şeklinde bulunmuştur. SONUÇ: Sonuç olarak, mutasyonların görülme sıklığı etnik kökenden ve coğrafik bölgelerden etkilenmektedir. Hatay bölgesi de kendine has bir etnik kökene sahiptir ve bu yüzden α-talasemi gen mutasyonları frekansları da kendine has bir özelliktedir.

References

  • Harteveld Cornelis L. and Higgs Douglas R. α- thalassaemia. Orhpanet J of Rare Diseases. ;5(13):1-21.
  • Higgs DR. The molecular basis of α-thalassaemia. Cold Spring Harb Perspect Med 2013; doi: 1101/cshperspect.a011718.
  • Vichinsky EP. Clinical manifestations of α- thalassaemia. Cold Spring Harb Perspect Med 2013; doi: 10.1101/cshperspect.a011742.
  • Higgs DR, Vickers MA, Wilkie AO, Pretorius IM, Jarman AP, Weatherall DJ. A review of the molecu- lar genetics of the human α-globin gene cluster. Blood 1989;73:1081-1104.
  • Lal A, Goldrich ML, Haines DA, Azimi M, Singer ST, Vichinsky EP. Heterogeneity of hemoglobin H disea- se in childhood. N Engl J Med 2011;364(8):710-8.
  • Flint J, Harding RM, Clegg JB, Boyce AJ. Why are some genetic diseases common? Distinguishing selection from other processes by molecular analy- sis of globin gene variants. Hum Genet 1993;91:91
  • Flint J, Harding RM, Boyce AJ, Clegg JB. The popu- lation genetics of the haemoglobinopathies. Baillie- res Clin Haematol 1998;11:1-51.
  • Celik MM, Gunesacar R, Oktay G, Duran GG, Kaya H. Spectrum of α-thalassemia mutations including first observation of - -(FIL) deletion in Hatay Provin- ce, Turkey. Blood Cells Mol Dis 2013;51(1):27-30.
  • Cürük MA. Hb H (Beta4) Disease in Cukurova, Southern Turkey. Hemoglobin 2007;31:265-271.
  • Oner C, Gürgey A, Oner R, Balkan H, Gümrük F, Baysal E, Altay C. The molecular basis of Hb H disea- se in Turkey. Hemoglobin 1997;21:41-51.
  • Sutcu R, Aylak F, Kocak H, Sipahi T, Vural H, Delibas N. The investigation of distribution of here- ditary alpha-thalassemia mutations in Isparta reser- voir. Eur J Basic Med Sci 2011;1:28-32.
  • Siala H, Ouali F, Messaoud T, Bibi A, Fattoum S. α-Thalassaemia in Tunisia: some epidemiological and molecular data. J Genet 2008;87:229-234.
  • El-Kalla S, Baysal E. Alpha-thalassemia in the United Arab Emirates, Acta Haematol 1998;100:49
  • Hadavi V, Jafroodi M, Hafezi-Nejad N, Mogha- dam SD, Eskandari F, Tarashohi S, Pourfahim H, Oberkanins C, Law HY, Najmabadi H. Alpha- thalassemia mutations in Gilan Province, North Iran. Hemoglobin 2009;33(3):235-41.
  • Abu Ghoush MW. Subtypes of alpha thalassemia diagnosed at a Medical Center in Jordan.TAF Prev Med Bull 2008;7:373-376.
  • Oron-Karni V, Filon D, Shifrin Y, Fried E, Pogre- bijsky G, Oppenheim A, Rund D. Diversity of alpha- globin mutations and clinical presentation of a- thalassemia in Israel. Am J Hematol 2000;65:196-203.
  • Hassan SM, Hamza N, Jaffer Al-Lawatiya F, Jaffer Mohammed A, Harteveld CL, Rajab A, Giordano PC. Extended molecular spectrum of beta- and alphat- halassemia in Oman. Hemoglobin 2010;34:127-134.
  • Hellani A, Fadel E, El-Sadadi S, El-Sweilam H, El- Dawood A, Abu-Amero KK. Molecular spectrum of alpha-thalassemia mutations in microcytic hypoch- romic anemia patients from Saudi Arabia. Genet Test Mol Biomarkers 2009;13:219-221.
  • Kyriacou K, Kyrri K, Kalogirou E, Vasiliades P, Angastiniotis M, Ioannou PA, Kleanthous M. Hb Bart's levels in cord blood and alpha-thalassemia mutations in Cyprus. Hemoglobin 2000;24:171-180.
  • Novelletto A, Hafez M, Di Rienzo A, Felicetti L, Deidda G, el Morsi Z, al-Tonbary Y, el-Ziny M, Abd- el-Gelil N, Terrenato L. Frequency and molecular types of deletional alpha-thalassemia in Egypt. Hum Genet 1989;81(3):211-3.
  • Di Bella C, Salpietro C, La Rosa M, Cuppari C, Piraino B, Cutri MR, Rigoli L. Identification of alpha- thalassemia mutations in subjects from Eastern Sicily (Italy) with abnormal hematological indices and normal Hb A2. Ann Hematol 2006;85:829-831.
  • Villegas A, Ropero P, González FA, Anguita E, Espinós D. The thalassemia syndromes: molecular characterization in the Spanish population. Hemog- lobin 2001;25:273-283.
  • Harteveld KL, Losekoot M, Heister AJ, van der Wielen M, Giordano PC, Bernini LF. Alpha- thalassemia in The Netherlands: a heterogeneous spectrum of both deletions and point mutations. Hum Genet 1997;100:465-471.
  • Souza AE, Cardoso GL, Takanashi SY, Guerreiron JF. Alpha-thalassemia (3.7 kb deletion) in a population from the Brazilian Amazon region: Santarém, Pará State. Genet Mol Res ;8:477-481
  • Baysal E, Kleanthous M, Bozkurt G, Kyrri A, Kalo- girou E, Angastiniotis M, Ioannou P, Huisman TH. Alpha-thalassaemia in the population of Cyprus. Br J Haematol 1995;89:496-499.
There are 25 citations in total.

Details

Primary Language Turkish
Journal Section Research Article
Authors

Özgür Aldemir This is me

Müzeyyen İzmirli This is me

Publication Date September 1, 2014
Published in Issue Year 2014

Cite

APA Aldemir, Ö., & İzmirli, M. (2014). Hataydaki α-Talasemi Genotipleri ve α-Talasemi Genotip Frekansı. Abant Medical Journal, 3(3), 233-236. https://doi.org/10.5505/abantmedj.2014.49358
AMA Aldemir Ö, İzmirli M. Hataydaki α-Talasemi Genotipleri ve α-Talasemi Genotip Frekansı. Abant Med J. September 2014;3(3):233-236. doi:10.5505/abantmedj.2014.49358
Chicago Aldemir, Özgür, and Müzeyyen İzmirli. “Hataydaki α-Talasemi Genotipleri Ve α-Talasemi Genotip Frekansı”. Abant Medical Journal 3, no. 3 (September 2014): 233-36. https://doi.org/10.5505/abantmedj.2014.49358.
EndNote Aldemir Ö, İzmirli M (September 1, 2014) Hataydaki α-Talasemi Genotipleri ve α-Talasemi Genotip Frekansı. Abant Medical Journal 3 3 233–236.
IEEE Ö. Aldemir and M. İzmirli, “Hataydaki α-Talasemi Genotipleri ve α-Talasemi Genotip Frekansı”, Abant Med J, vol. 3, no. 3, pp. 233–236, 2014, doi: 10.5505/abantmedj.2014.49358.
ISNAD Aldemir, Özgür - İzmirli, Müzeyyen. “Hataydaki α-Talasemi Genotipleri Ve α-Talasemi Genotip Frekansı”. Abant Medical Journal 3/3 (September 2014), 233-236. https://doi.org/10.5505/abantmedj.2014.49358.
JAMA Aldemir Ö, İzmirli M. Hataydaki α-Talasemi Genotipleri ve α-Talasemi Genotip Frekansı. Abant Med J. 2014;3:233–236.
MLA Aldemir, Özgür and Müzeyyen İzmirli. “Hataydaki α-Talasemi Genotipleri Ve α-Talasemi Genotip Frekansı”. Abant Medical Journal, vol. 3, no. 3, 2014, pp. 233-6, doi:10.5505/abantmedj.2014.49358.
Vancouver Aldemir Ö, İzmirli M. Hataydaki α-Talasemi Genotipleri ve α-Talasemi Genotip Frekansı. Abant Med J. 2014;3(3):233-6.