Acil Serviste COVID-19 Şüpheli Hastaların Polimeraz Zincir Reaksiyonu ve Bilgisayarlı Tomografi İnfiltrasyonları Arasındaki İlişki
Year 2024,
Volume: 7 Issue: 2, 56 - 62, 29.06.2024
Saltuk Bugra Karaca
,
Betül Gülalp
,
Murat Muratoglu
,
Rahime Sezer
,
Hale Turnaoğlu
,
M. Şule Akçay
,
Elif Küpeli
,
Eylem Gül Ateş
,
Meriç Yavuz Çolak
Abstract
Amaç: Acil Serviste (ED) Polimeraz Zincir Reaksiyonunun (PCR) sınırlamaları göz önüne alındığında, COVID-19'u değerlendirmek için alternatif doğrulama yöntemlerine ihtiyaç vardır. Bu çalışmanın amacı, Kuzey Amerika Radyoloji Derneği (RSNA) tavsiyelerine uygun olarak, pulmoner infiltrasyonları olan şüpheli COVID-19 hastaları için Toraks Bilgisayarlı Tomografisinin (T-BT) performansını değerlendirmektir.
Gereç ve Yöntemler: Mart-Ağustos 2020 tarihleri arasında, COVID-19 şüphesi olan 324 acil servis hastasına T-BT taraması yapılmıştır. Kör radyologlar, T-BT taramalarını RSNA kılavuzlarına göre bağımsız olarak değerlendirmiştir. Referans test olarak ters transkriptaz polimeraz zincir reaksiyonu (RT-PCR) kullanılmıştır.
Bulgular: 324 hastanın %35'inde RT-PCR testi pozitif çıkmıştır. T-CT kategorileri tipik (%35,2), belirsiz (%47,5) ve atipik (%11,1) olarak belirlenmiştir. Tipik T-CT kategori eşiğinin kullanılması %66 duyarlılık, %81 özgüllük, %65 pozitif prediktif değer (PPV), %82 negatif prediktif değer (NPV) ve %76 doğruluk ile sonuçlanmıştır. Tekrarlanan RT-PCR testlerinin alt grup analizi performansı iyileştirmiştir: %80 duyarlılık, %79 özgüllük, %76 PPV, %83 NPV ve %79 doğruluk. Acil serviste RT-PCR ve T-CT'nin birleştirilmesi %95,5 duyarlılık, %79 PPV ve %86,4 doğruluk sağlamıştır.
Sonuç: RSNA kılavuzları uyarınca, T-CT COVID-19'u tespit etmek için orta düzeyde hassasiyet ve yüksek özgüllük sergilemektedir. Şüpheli vakaların bulunduğu acil servis ortamlarında T-CT, ilk negatif RT-PCR sonucunun ardından yeniden test yapılmasını önermeye yardımcı olarak erken yönetimi ve zamanında izolasyon önlemlerini kolaylaştırır. RT-PCR ve T-CT'nin birlikte kullanımı tanısal performansı artırarak bu yöntemlerin entegre edilmesinin potansiyel faydalarını vurgulamaktadır.
References
- Weissleder R, Lee H, Ko J, Pittet MJ. COVID-19 diagnostics in context. Sci Transl Med. 2020 Jun 3;12(546):eabc1931. doi: 10.1126/scitranslmed.abc1931
- Long DR, Gombar S, Hogan CA, et al. Occurrence and Timing of Subsequent SARS-CoV-2 RT-PCR Positivity Among Initially Negative Patients. medRxiv. May 8 2020;doi:10.1101/2020.05.03.20089151
- Wikramaratna P, Paton RS, Ghafari M, Lourenco J: Estimating falsenegative detection rate of SARS-CoV-2 by RT-PCR. Euro Surveill. Dec 2020;25(50). doi: 10.2807/1560-7917.ES.2020.25.50.2000568
- Xiao AT, Tong YX, Zhang S. False negative of RT-PCR and prolonged nucleic acid conversion in COVID-19: Rather than recurrence. J Med Virol. Oct 2020;92(10):1755-1756. doi:10.1002/jmv.25855
- Ai T, Yang Z, Hou H, et al. Correlation of Chest CT and RT-PCR Testing for Coronavirus Disease 2019 (COVID-19) in China: A Report of 1014 Cases. Radiology. Aug 2020;296(2):E32-e40. doi:10.1148/radiol.2020200642
- Simpson S, Kay FU, Abbara S, et al. Radiological Society of North America Expert Consensus Document on Reporting Chest CT Findings Related to COVID-19: Endorsed by the Society of Thoracic Radiology, the American College of Radiology, and RSNA. Radiol Cardiothorac Imaging. Apr 2020;2(2):e200152. doi:10.1148/ryct.2020200152
- Bai HX, Hsieh B, Xiong Z, et al. Performance of Radiologists in Differentiating COVID-19 from Non-COVID-19 Viral Pneumonia at Chest CT. Radiology. Aug 2020;296(2):E46-e54. doi:10.1148/radiol.2020200823
- Waller JV, Kaur P, Tucker A, et al. Diagnostic Tools for Coronavirus Disease (COVID-19): Comparing CT and RT-PCR Viral Nucleic Acid Testing. AJR Am J Roentgenol. Oct 2020;215(4):834-838. doi:10.2214/ajr.20.23418
- Caruso D, Zerunian M, Polici M, et al. Chest CT Features of COVID-19 in Rome, Italy. Radiology. Aug 2020;296(2):E79-e85. doi:10.1148/radiol.2020201237
- Long C, Xu H, Shen Q, et al. Diagnosis of the Coronavirus disease(COVID-19): rRT-PCR or CT? Eur J Radiol. May 2020;126:108961. doi:10.1016/j.ejrad.2020.108961
- Ohana M, Muller J, Severac F, et al. Temporal variations in the diagnostic performance of chest CT for Covid-19 depending on disease prevalence: Experience from North-Eastern France. Eur J Radiol. Jan 2021;134:109425. doi:10.1016/j.ejrad.2020.109425
- Salameh JP, Leeflang MM, Hooft L, et al. Thoracic imaging tests for the diagnosis of COVID-19. Cochrane Database Syst Rev. Sep 30 2020;9:Cd013639. doi:10.1002/14651858.CD013639.pub2
- Falaschi Z, Danna PSC, Arioli R, et al. Chest CT accuracy in diagnosing COVID-19 during the peak of the Italian epidemic: A retrospective correlation with RT-PCR testing and analysis of discordant cases. Eur J Radiol. Sep 2020;130:109192. doi:10.1016/j.ejrad.2020.109192
- Kavak S, Duymus R. RSNA and BSTI grading systems of COVID-19 pneumonia: comparison of the diagnostic performance and interobserver agreement. BMC Med Imaging. Oct 4 2021;21(1):143. doi:10.1186/s12880-021-00668-3
- Rocha CO, Prioste TAD, Faccin CS, et al. Diagnostic performance of the RSNA-proposed classification for COVID-19 pneumonia versus prepandemic controls. Braz J Infect Dis. Jan-Feb 2022;26(1):101665. doi:10.1016/j.bjid.2021.101665
- Majeed T, Ali RS, Solomon J, et al. The Role of the Computed Tomography (CT) Thorax in the Diagnosis of COVID-19 for Patients Presenting with Acute Surgical Emergencies. A Single Institute Experience. Indian J Surg. Dec 2020;82(6):1005-1010. doi:10.1007/s12262-020-02626-9
- Barbosa P, Bitencourt AGV, de Miranda GD, Almeida MFA, Chojniak R. Chest CT accuracy in the diagnosis of SARS-CoV-2 infection: initial experience in a cancer center. Radiol Bras. Jul-Aug 2020;53(4):211-215. doi:10.1590/0100-3984.2020.0040
- Miranda Magalhães Santos JM, Paula Alves Fonseca A, et al. Initial Results of the Use of a Standardized Diagnostic Criteria for Chest Computed Tomography Findings in Coronavirus Disease 2019. J Comput Assist Tomogr. Sep/Oct 2020;44(5):647-651. doi:10.1097/rct.0000000000001054
- Hammer MM. Real-World Diagnostic Performance of RSNA Consensus Reporting Guidelines for Findings Related to COVID-19 on Chest CT. AJR Am J Roentgenol. Jan 2022;218(1):75-76. doi:10.2214/ajr.21.26560
- Fang Y, Zhang H, Xie J, et al. Sensitivity of Chest CT for COVID-19: Comparison to RT-PCR. Radiology. Aug 2020;296(2):E115-e117. doi:10.1148/radiol.2020200432
The Relation of Polymerase Chain Reaction and Computed Tomography Infiltrations of Suspected Covid-19 Patients in Emergency Department
Year 2024,
Volume: 7 Issue: 2, 56 - 62, 29.06.2024
Saltuk Bugra Karaca
,
Betül Gülalp
,
Murat Muratoglu
,
Rahime Sezer
,
Hale Turnaoğlu
,
M. Şule Akçay
,
Elif Küpeli
,
Eylem Gül Ateş
,
Meriç Yavuz Çolak
Abstract
Aim: Considering the limitations of Polymerase Chain Reaction (PCR) in the Emergency Department (ED), alternative confirmation methods for assessing COVID-19 are needed. This study aimed to evaluate the performance of Thorax-Computed Tomography (TCT), following Radiological Society of North America (RSNA) recommendations, for suspected COVID-19 patients with pulmonary infiltrations.
Material and Methods: From March to August 2020, 324 ED patients with suspected COVID-19 underwent T-CT scans. Blinded radiologists independently assessed T-CT scans based on RSNA guidelines. Reverse transcriptase polymerase chain reaction (RTPCR) served as the reference test.
Results: Of 324 patients, 35% tested positive via RT-PCR. T-CT categories were typical (35.2%), indeterminate (47.5%), and atypical (11.1%). Using a typical T-CT category threshold resulted in 66% sensitivity, 81% specificity, 65% positive predictive value (PPV), 82% negative predictive value (NPV), and 76% accuracy. Subgroup analysis of repeat RT-PCR tests improved performance: 80% sensitivity, 79% specificity, 76% PPV, 83% NPV, and 79% accuracy. Combining RT-PCR and T-CT in the ED achieved 95.5% sensitivity, 79% PPV, and 86.4% accuracy.
Conclusion: Following RSNA guidelines, T-CT exhibits moderatesensitivity and high specificity for detecting COVID-19. In EDsettings with suspected cases, T-CT aids in recommending retesting after an initial negative RT-PCR result, facilitating early management and timely isolation measures. The combined use of RT-PCR and T-CT enhances diagnostic performance, emphasizing the potential benefits of integrating these methods.
Ethical Statement
This retrospective study adhered to the ethical standards set by the institutional and national research committee, as well as the 1964 Helsinki Declaration and its subsequent amendments or comparable ethical guidelines. The study received approval from the Baskent University Local Ethics Committee (registration number: KA20/225).
References
- Weissleder R, Lee H, Ko J, Pittet MJ. COVID-19 diagnostics in context. Sci Transl Med. 2020 Jun 3;12(546):eabc1931. doi: 10.1126/scitranslmed.abc1931
- Long DR, Gombar S, Hogan CA, et al. Occurrence and Timing of Subsequent SARS-CoV-2 RT-PCR Positivity Among Initially Negative Patients. medRxiv. May 8 2020;doi:10.1101/2020.05.03.20089151
- Wikramaratna P, Paton RS, Ghafari M, Lourenco J: Estimating falsenegative detection rate of SARS-CoV-2 by RT-PCR. Euro Surveill. Dec 2020;25(50). doi: 10.2807/1560-7917.ES.2020.25.50.2000568
- Xiao AT, Tong YX, Zhang S. False negative of RT-PCR and prolonged nucleic acid conversion in COVID-19: Rather than recurrence. J Med Virol. Oct 2020;92(10):1755-1756. doi:10.1002/jmv.25855
- Ai T, Yang Z, Hou H, et al. Correlation of Chest CT and RT-PCR Testing for Coronavirus Disease 2019 (COVID-19) in China: A Report of 1014 Cases. Radiology. Aug 2020;296(2):E32-e40. doi:10.1148/radiol.2020200642
- Simpson S, Kay FU, Abbara S, et al. Radiological Society of North America Expert Consensus Document on Reporting Chest CT Findings Related to COVID-19: Endorsed by the Society of Thoracic Radiology, the American College of Radiology, and RSNA. Radiol Cardiothorac Imaging. Apr 2020;2(2):e200152. doi:10.1148/ryct.2020200152
- Bai HX, Hsieh B, Xiong Z, et al. Performance of Radiologists in Differentiating COVID-19 from Non-COVID-19 Viral Pneumonia at Chest CT. Radiology. Aug 2020;296(2):E46-e54. doi:10.1148/radiol.2020200823
- Waller JV, Kaur P, Tucker A, et al. Diagnostic Tools for Coronavirus Disease (COVID-19): Comparing CT and RT-PCR Viral Nucleic Acid Testing. AJR Am J Roentgenol. Oct 2020;215(4):834-838. doi:10.2214/ajr.20.23418
- Caruso D, Zerunian M, Polici M, et al. Chest CT Features of COVID-19 in Rome, Italy. Radiology. Aug 2020;296(2):E79-e85. doi:10.1148/radiol.2020201237
- Long C, Xu H, Shen Q, et al. Diagnosis of the Coronavirus disease(COVID-19): rRT-PCR or CT? Eur J Radiol. May 2020;126:108961. doi:10.1016/j.ejrad.2020.108961
- Ohana M, Muller J, Severac F, et al. Temporal variations in the diagnostic performance of chest CT for Covid-19 depending on disease prevalence: Experience from North-Eastern France. Eur J Radiol. Jan 2021;134:109425. doi:10.1016/j.ejrad.2020.109425
- Salameh JP, Leeflang MM, Hooft L, et al. Thoracic imaging tests for the diagnosis of COVID-19. Cochrane Database Syst Rev. Sep 30 2020;9:Cd013639. doi:10.1002/14651858.CD013639.pub2
- Falaschi Z, Danna PSC, Arioli R, et al. Chest CT accuracy in diagnosing COVID-19 during the peak of the Italian epidemic: A retrospective correlation with RT-PCR testing and analysis of discordant cases. Eur J Radiol. Sep 2020;130:109192. doi:10.1016/j.ejrad.2020.109192
- Kavak S, Duymus R. RSNA and BSTI grading systems of COVID-19 pneumonia: comparison of the diagnostic performance and interobserver agreement. BMC Med Imaging. Oct 4 2021;21(1):143. doi:10.1186/s12880-021-00668-3
- Rocha CO, Prioste TAD, Faccin CS, et al. Diagnostic performance of the RSNA-proposed classification for COVID-19 pneumonia versus prepandemic controls. Braz J Infect Dis. Jan-Feb 2022;26(1):101665. doi:10.1016/j.bjid.2021.101665
- Majeed T, Ali RS, Solomon J, et al. The Role of the Computed Tomography (CT) Thorax in the Diagnosis of COVID-19 for Patients Presenting with Acute Surgical Emergencies. A Single Institute Experience. Indian J Surg. Dec 2020;82(6):1005-1010. doi:10.1007/s12262-020-02626-9
- Barbosa P, Bitencourt AGV, de Miranda GD, Almeida MFA, Chojniak R. Chest CT accuracy in the diagnosis of SARS-CoV-2 infection: initial experience in a cancer center. Radiol Bras. Jul-Aug 2020;53(4):211-215. doi:10.1590/0100-3984.2020.0040
- Miranda Magalhães Santos JM, Paula Alves Fonseca A, et al. Initial Results of the Use of a Standardized Diagnostic Criteria for Chest Computed Tomography Findings in Coronavirus Disease 2019. J Comput Assist Tomogr. Sep/Oct 2020;44(5):647-651. doi:10.1097/rct.0000000000001054
- Hammer MM. Real-World Diagnostic Performance of RSNA Consensus Reporting Guidelines for Findings Related to COVID-19 on Chest CT. AJR Am J Roentgenol. Jan 2022;218(1):75-76. doi:10.2214/ajr.21.26560
- Fang Y, Zhang H, Xie J, et al. Sensitivity of Chest CT for COVID-19: Comparison to RT-PCR. Radiology. Aug 2020;296(2):E115-e117. doi:10.1148/radiol.2020200432