Determination of Resistance Sources to BCMV and BCMNV in Some Common Bean (Phaseolus vulgaris L.) Cultivars Grown in Turkey
Year 2020,
Volume: 6 Issue: 3, 453 - 460, 21.12.2020
Gülsüm Palacıoğlu
,
İzel Şanlı
Harun Bayraktar
,
Göksel Özer
Abstract
Bean common mosaic virus (BCMV) and Bean common mosaic necrosis virus (BCMNV) are the common plant pathogens that cause significant yield losses in bean growing areas worldwide. The most effective and practical control method is to use of resistant common bean cultivars to BCMV and BCMNV. Many genes and molecular markers associated with resistance to these pathogens have been identified and used widely in breeding studies in the world. This study evaluated the presence of resistance sources in 39 common bean cultivars, widely grown in Turkey to BCMV and BCMNV with different molecular markers (SW-13, SBD-5, ROC11, eIFE4). Eleven common bean cultivars contained only one resistance gene. Also, the cultivars were evaluated for resistance gene combinations to these pathogens; twenty-five cultivars possessed gene combination of I+bc-12. Resistance in Fransız, Karabacak and 40 Günlük cultivars was controlled by the bc-12 and bc-3 gene combination. These resistance genes identified in this study could be used as valuable resistance sources for developing breeding materials resistant to BCMV and BCMNV.
References
- Bello, M. H., Moghaddam, S. M., Massoudi, M., McClean, P. E., Cregan, P. B., & Miklas, P. N. (2014). Application of in silico bulked segregant analysis for rapid development of markers linked to Bean common mosaic virus resistance in common bean. BMC Genomics, 15(1), 903.
- Blair, M. W., Buendia, H. F., Castano, M., Santana, G. E., & Morales, F. (2004). Adaptation and use of SCAR markers for BCNMV resistance (bc-3 and dominant/genes) in an Adean bean breeding program. South African Plant Breeding Conference, Durban, South Africa.
- Boersma, J. G., Conner, R. L., Balasubramanian, P. M., Navabi, A., Yu, K., & Hou, A. (2014). Combining resistance to common bacterial blight, anthracnose, and bean common mosaic virus into Manitoba-adapted dry bean (Phaseolus vulgaris L.) cultivars. Canadian Journal of Plant Science, 94(2), 405-415.
- Chew, M. Y. I., Velásquez, V. R., Mena, C. J., & Gaytán, M. A. (2010). Virus de frijol en la Comarca Lagunera y Zacatecas. Folleto Técnico Campo Experimental Zacatecas CIRNOC-INIFAP, Zacatecaz, 41.
- Deligöz, İ., & Sökmen, M. A. (2013). Bazı fasulye genotiplerinin Bean common mosaic virus (BCMV) ve Bean common mosaic necrosis virus (BCMNV)'a dayanıklılık durumlarının kalitatif, kantitatif ve moleküler yöntemlerle belirlenmesi. Bitki Koruma Bülteni, 53(2), 101-113.
- Deligöz, İ., Sarı, S., & Karaağaç, O. (2015). Karadeniz Tarımsal Araştırma Enstitüsü tarafından geliştirilen taze fasulye ıslah hatları ve bazı ticari çeşitlerin Bean common mosaic virus (BCMV)’a dayanıklılık durumlarının araştırılması. Derim, 32(1), 1-10.
- Drijfhout, E. (1978). Genetic Interaction Between Phaseolus vulgaris and Bean Common Mosaic Virus with Implications for Strain Identification and Breeding for Resistance. Centre for Agricultural Publication and Documents, Wageningen, the Netherlands.
- Drijfhout, E., & Morales, F. (2005). Bean common mosaic. In: H. F. Schwartz, J. R. Steadman, R. Hall, & R. L. Forster (Eds.), Compendium of Bean Diseases, 2nd ed. (Pp: 60-62). APS press, St. Paul, MN.
- Feng, X., Myers, J. R., & Karasev, A. V. (2015). Bean common mosaic virus isolate exhibits a novel pathogenicity profile in common bean, overcoming the bc-3 resistance allele coding for the mutated EIF4E translation initiation factor. Phytopathology 105, 1487-1495.
- Haley, S. D., Afanador, L., & Kelly, J. D. (1994). Identification and application of a random amplified polymorphic DNA marker for the I gene (potyvirus resistance) in common bean. Phytopathology, 84(2), 157-160.
- Hall, R. (1994). Bean Diseases, Bean Pathogens, Bean Disease Control. Compendium of Bean Diseases, APS press, Minnesota, USA.
- Hart, J. P., & Griffiths, P. D. (2013). A series of eIF4E alleles at the Bc-3 locus are associated with recessive resistance to Clover yellow vein virus in common bean. Theoretical and Applied Genetics, 126(11), 2849-2863.
- Johnson, W. C., Guzmán, P., Mandala, D., Mkandawire, A. B. C., Temple, S., Gilbertson, R. L., & Gepts, P. (1997). Molecular tagging of the BC-3 gene for introgression into Andean common bean. Crop Science, 37(1), 248-254.
- Kelly, J. D., Afanador, L., & Haley, S. D. (1995). Pyramiding genes for resistance to bean common mosaic virus. Euphytica, 82(3), 207-212.
- Kelly, J. D. (1997). A review of varietal response to bean common mosaic potyvirus in Phaseolus vulgaris. Plant Varieties and Seeds, 10(1), 1-6.
- Melotto, M., Afanador, L., & Kelly, J. D. (1996). Development of a SCAR marker linked to the I gene in common bean. Genome, 39(6), 1216-1219.
- Miklas, P., Larsen, R., & Kelly, J. (1998). Localized Vein Necrosis to BCMNV in Pinto P94207 is Conditioned by a Dominant Gene. Bean Improvement Cooperative, USA.
- Miklas, P. N., Larsen, R. C., Riley, R., & Kelly, J. D. (2000). Potential marker-assisted selection for bc-1 2 resistance to bean common mosaic potyvirus in common bean. Euphytica, 116(3), 211-219.
- Morales, F. J., & Bos, L. (1988). Bean common mosaic virus. Online publication. Descriptions of Plant Virüses No. 337. http://www.dpvweb.net7dpv/showdpv.php?dpvno=337. Access date: April 15, 2020.
- Mukeshimana, G., Paneda, A., Rodríguez-Suárez, C., Ferreira, J. J., Giraldez, R., & Kelly, J. D. (2005). Markers linked to the bc-3 gene conditioning resistance to bean common mosaic potyviruses in common bean. Euphytica, 144(3), 291-299.
- Naderpour, M., Lund, O. S., Larsen, R., & Johansen, E. (2010). Potyviral resistance derived from cultivars of Phaseolus vulgaris carrying BC‐3 is associated with the homozygotic presence of a mutated eIF4E allele. Molecular Plant Pathology, 11(2), 255-263.
- Pasev, G., Kostova, D., & Sofkova, S. (2013). Identification of genes for resistance to Bean common mosaic virus and Bean common mosaic necrosis virus in snap bean (Phaseolus vulgaris L.) breeding lines using conventional and molecular methods. Journal of Phytopathology, 162(1), 19-25.
- Ruhımbana, C., & Mutlu, N. (2019). Marker-assisted pyramiding potyvirus resistance genes into Rwandan common bean (Phaseolus vulgaris L.) genotypes. Mediterranean Agricultural Sciences, 32(3), 1-1.
- Strausbaugh, C. A., Myers, J. R., Forster, R. L., & McClean, P. E. (1999). bc-1 and bc-u—two loci controlling bean common mosaic virus resistance in common bean are linked. Journal of the American Society for Horticultural Science, 124(6), 644-648.
- TUİK. (2020). Türkiye İstatistik Kurumu, Bitkisel Üretim İstatistikleri. http://www.tuik.gov.tr. Erişim tarihi 20 Mayıs 2020.
- Yeken, M. Z., Özer, G., Çelik, A., & Çiftçi, V. (2018). Türkiye'de ticari fasulye (Phaseolus vulgaris L.) çeşitlerinde bean common mosaic virus ve bean common mosaic necrosis virus etmenlerine dayanıklılıkla ilişkili genlerin karakterizasyonu. Türk Tarım ve Doğa Bilimleri Dergisi, 5(4), 613-619.
- Wani, A. B., Bhat, M. A., Husaini, A. M., & Sidiqi, I. (2017). Screening of important bean genotypes/collections for resistance against Common Bean Mosaic Virus using molecular markers. Journal of Pharmacognosy and Phytochemistry, 6(4), 343-347.
Ülkemizde Yetiştirilen Bazı Fasulye (Phaseolus vulgaris L.) Çeşitlerinin BCMV ve BCMNV’e Karşı Dayanıklılık Kaynaklarının Belirlenmesi
Year 2020,
Volume: 6 Issue: 3, 453 - 460, 21.12.2020
Gülsüm Palacıoğlu
,
İzel Şanlı
Harun Bayraktar
,
Göksel Özer
Abstract
Bean common mosaic virus (BCMV) ve Bean common mosaic necrosis virus (BCMNV) dünyada fasulye üretim alanlarında yaygın olarak görülen ve önemli verim kayıplarına neden olan hastalık etmenleridir. Bu hastalık etmenlerine karşı en etkili ve pratik mücadele yöntemi ise dayanıklı çeşit kullanılmasıdır. Bu kapsamda dünyada bu etmenlere karşı dayanıklılıkla ilişkili çok sayıda gen ve bunlarla ilişkili moleküler markör tespit edilmiş olup ıslah çalışmalarında yaygın olarak kullanılmaktadır. Bu çalışmada ise ülkemizde yaygın olarak yetiştirilen 39 adet fasulye çeşidinin BCMV ve BCMNV hastalıklarına karşı dayanıklılık kaynakları farklı moleküler markörler (SW-13, SBD-5, ROC11, eIFE4) kullanılarak araştırılmıştır. Elde edilen sonuçlar test edilen fasulye genotiplerinden 11 adedinin tek bir dayanıklılık geni içerdiğini göstermiştir. Ayrıca farklı dayanıklılık gen kombinasyonları bakımından 25 fasulye çeşidinde I+bc-12 genlerinin bulunduğu görülmüştür. Fransız, Karabacak ve 40 Günlük fasulye çeşitlerinde ise dayanıklılığın bc-12 ve bc-3 genleri ile kontrol edildiği tespit edilmiştir. Yapılan çalışma ile tespit edilen dayanıklılık genlerinin söz konusu hastalıklara karşı dayanıklı ıslah materyallerinin geliştirilmesinde önemli birer dayanıklılık kaynağı olarak kullanılabilecekleri düşünülmektedir.
References
- Bello, M. H., Moghaddam, S. M., Massoudi, M., McClean, P. E., Cregan, P. B., & Miklas, P. N. (2014). Application of in silico bulked segregant analysis for rapid development of markers linked to Bean common mosaic virus resistance in common bean. BMC Genomics, 15(1), 903.
- Blair, M. W., Buendia, H. F., Castano, M., Santana, G. E., & Morales, F. (2004). Adaptation and use of SCAR markers for BCNMV resistance (bc-3 and dominant/genes) in an Adean bean breeding program. South African Plant Breeding Conference, Durban, South Africa.
- Boersma, J. G., Conner, R. L., Balasubramanian, P. M., Navabi, A., Yu, K., & Hou, A. (2014). Combining resistance to common bacterial blight, anthracnose, and bean common mosaic virus into Manitoba-adapted dry bean (Phaseolus vulgaris L.) cultivars. Canadian Journal of Plant Science, 94(2), 405-415.
- Chew, M. Y. I., Velásquez, V. R., Mena, C. J., & Gaytán, M. A. (2010). Virus de frijol en la Comarca Lagunera y Zacatecas. Folleto Técnico Campo Experimental Zacatecas CIRNOC-INIFAP, Zacatecaz, 41.
- Deligöz, İ., & Sökmen, M. A. (2013). Bazı fasulye genotiplerinin Bean common mosaic virus (BCMV) ve Bean common mosaic necrosis virus (BCMNV)'a dayanıklılık durumlarının kalitatif, kantitatif ve moleküler yöntemlerle belirlenmesi. Bitki Koruma Bülteni, 53(2), 101-113.
- Deligöz, İ., Sarı, S., & Karaağaç, O. (2015). Karadeniz Tarımsal Araştırma Enstitüsü tarafından geliştirilen taze fasulye ıslah hatları ve bazı ticari çeşitlerin Bean common mosaic virus (BCMV)’a dayanıklılık durumlarının araştırılması. Derim, 32(1), 1-10.
- Drijfhout, E. (1978). Genetic Interaction Between Phaseolus vulgaris and Bean Common Mosaic Virus with Implications for Strain Identification and Breeding for Resistance. Centre for Agricultural Publication and Documents, Wageningen, the Netherlands.
- Drijfhout, E., & Morales, F. (2005). Bean common mosaic. In: H. F. Schwartz, J. R. Steadman, R. Hall, & R. L. Forster (Eds.), Compendium of Bean Diseases, 2nd ed. (Pp: 60-62). APS press, St. Paul, MN.
- Feng, X., Myers, J. R., & Karasev, A. V. (2015). Bean common mosaic virus isolate exhibits a novel pathogenicity profile in common bean, overcoming the bc-3 resistance allele coding for the mutated EIF4E translation initiation factor. Phytopathology 105, 1487-1495.
- Haley, S. D., Afanador, L., & Kelly, J. D. (1994). Identification and application of a random amplified polymorphic DNA marker for the I gene (potyvirus resistance) in common bean. Phytopathology, 84(2), 157-160.
- Hall, R. (1994). Bean Diseases, Bean Pathogens, Bean Disease Control. Compendium of Bean Diseases, APS press, Minnesota, USA.
- Hart, J. P., & Griffiths, P. D. (2013). A series of eIF4E alleles at the Bc-3 locus are associated with recessive resistance to Clover yellow vein virus in common bean. Theoretical and Applied Genetics, 126(11), 2849-2863.
- Johnson, W. C., Guzmán, P., Mandala, D., Mkandawire, A. B. C., Temple, S., Gilbertson, R. L., & Gepts, P. (1997). Molecular tagging of the BC-3 gene for introgression into Andean common bean. Crop Science, 37(1), 248-254.
- Kelly, J. D., Afanador, L., & Haley, S. D. (1995). Pyramiding genes for resistance to bean common mosaic virus. Euphytica, 82(3), 207-212.
- Kelly, J. D. (1997). A review of varietal response to bean common mosaic potyvirus in Phaseolus vulgaris. Plant Varieties and Seeds, 10(1), 1-6.
- Melotto, M., Afanador, L., & Kelly, J. D. (1996). Development of a SCAR marker linked to the I gene in common bean. Genome, 39(6), 1216-1219.
- Miklas, P., Larsen, R., & Kelly, J. (1998). Localized Vein Necrosis to BCMNV in Pinto P94207 is Conditioned by a Dominant Gene. Bean Improvement Cooperative, USA.
- Miklas, P. N., Larsen, R. C., Riley, R., & Kelly, J. D. (2000). Potential marker-assisted selection for bc-1 2 resistance to bean common mosaic potyvirus in common bean. Euphytica, 116(3), 211-219.
- Morales, F. J., & Bos, L. (1988). Bean common mosaic virus. Online publication. Descriptions of Plant Virüses No. 337. http://www.dpvweb.net7dpv/showdpv.php?dpvno=337. Access date: April 15, 2020.
- Mukeshimana, G., Paneda, A., Rodríguez-Suárez, C., Ferreira, J. J., Giraldez, R., & Kelly, J. D. (2005). Markers linked to the bc-3 gene conditioning resistance to bean common mosaic potyviruses in common bean. Euphytica, 144(3), 291-299.
- Naderpour, M., Lund, O. S., Larsen, R., & Johansen, E. (2010). Potyviral resistance derived from cultivars of Phaseolus vulgaris carrying BC‐3 is associated with the homozygotic presence of a mutated eIF4E allele. Molecular Plant Pathology, 11(2), 255-263.
- Pasev, G., Kostova, D., & Sofkova, S. (2013). Identification of genes for resistance to Bean common mosaic virus and Bean common mosaic necrosis virus in snap bean (Phaseolus vulgaris L.) breeding lines using conventional and molecular methods. Journal of Phytopathology, 162(1), 19-25.
- Ruhımbana, C., & Mutlu, N. (2019). Marker-assisted pyramiding potyvirus resistance genes into Rwandan common bean (Phaseolus vulgaris L.) genotypes. Mediterranean Agricultural Sciences, 32(3), 1-1.
- Strausbaugh, C. A., Myers, J. R., Forster, R. L., & McClean, P. E. (1999). bc-1 and bc-u—two loci controlling bean common mosaic virus resistance in common bean are linked. Journal of the American Society for Horticultural Science, 124(6), 644-648.
- TUİK. (2020). Türkiye İstatistik Kurumu, Bitkisel Üretim İstatistikleri. http://www.tuik.gov.tr. Erişim tarihi 20 Mayıs 2020.
- Yeken, M. Z., Özer, G., Çelik, A., & Çiftçi, V. (2018). Türkiye'de ticari fasulye (Phaseolus vulgaris L.) çeşitlerinde bean common mosaic virus ve bean common mosaic necrosis virus etmenlerine dayanıklılıkla ilişkili genlerin karakterizasyonu. Türk Tarım ve Doğa Bilimleri Dergisi, 5(4), 613-619.
- Wani, A. B., Bhat, M. A., Husaini, A. M., & Sidiqi, I. (2017). Screening of important bean genotypes/collections for resistance against Common Bean Mosaic Virus using molecular markers. Journal of Pharmacognosy and Phytochemistry, 6(4), 343-347.