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Isolation and Molecular Identification of Streptomyces tendae and its Xylanase Production Using Cost-Effective Agro‐Residues

Year 2025, Early View, 1 - 1

Mustafa Oskay

https://doi.org/10.35378/gujs.1489525

Abstract

Due to their biotechnological importance in different industrial fields, xylanases from microorganisms have been the focus of great attention. In this regard, bacterial strain, SHB_02, one of the best xylanase producer isolated during a screening study from soil, was identified as Streptomyces tendae (GenBank accession no. OP893637) based on phenotypic characters and 16S rRNA gene sequencing. Experiments were carried out with three different agro-residues, such as corncob, wheat bran and wheat straw, for xylanase production by fermentation. The optimum parameters for producing the xylanase from Streptomyces tendae were temperature 30 oC, pH 7.5, incubation period 72 h, inoculum concentration 2%, and shaking speed 140 rpm. Among the agricultural by-products, wheat straw, 3% (w/v), has the highest xylanase as the sole carbon source. On the other hand, the best nitrogen source was determined to be yeast extract (0.25%). The xylanase was stable at pH 8 and 50 oC for at least two h. These findings suggest that a novel strain of Streptomyces tendae may produce xylanase that can be obtained inexpensively by fermentation using agro-residues.

Keywords

Agro-Residues Fermentation Production Streptomyces tendae Xylanase activity

References

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Year 2025, Early View, 1 - 1

Mustafa Oskay

https://doi.org/10.35378/gujs.1489525

Abstract

References

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  • [3] Puchart, V., Biely, P., "A simple enzymatic synthesis of 4-nitrophenyl β-1,4-d-xylobioside, a chromogenic substrate for assay and differentiation of endoxylanases", Journal of Biotechnology, 128(3): 576–586, (2007). DOI: https://doi.org/10.1016/j.jbiotec.2006.12.011
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  • [11] Mendonça, M., Barroca, M., Collins, T., "Endo-1,4-β-xylanase-containing glycoside hydrolase families: characteristics, singularities and similarities", Biotechnology Advances, 65(108148), (2023). DOI: https://doi.org/10.1016/j.biotechadv.2023.108148
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  • [13] Ho, H.L., "Biotechnology of Microbial Xylanase: Overview", Research Advancements in Pharmaceutical, Nutritional, and Industrial Enzymology, 294-325, (2018). DOI: https://doi.org/10.4018/978-1-5225-5237-6.ch013
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  • [17] Gomes, J., Gomes, I., Terler, K., Gubala, N., Ditzelmüller, G., Steiner, W., "Optimisation of culture medium and conditions for α-L-arabinofuranosidase production by the extreme thermophilic eubacterium Rhodothermus marinus", Enzyme and Microbial Technology, 27(6): 414–422, (2000). DOI: https://doi.org/10.1016/S0141-0229(00)00229-5
  • [18] Oskay, M., "Comparison of Streptomyces diversity between agricultural and non-agricultural soils by using various culture media", Scientific Research and Essays, 4(10): 997–1005, (2009).
  • [19] Oskay, M., Tamer, A. Ü., Azeri, C., "Antibacterial activity of some actinomycetes isolated from farming soils of Turkey", African Journal of Biotechnology, 3(9): 441–446, (2004).
  • [20] Techapun, C., Sinsuwongwat, S., Poosaran, N., Watanabe, M., Sasaki, K., "Production of a cellulase-free xylanase from agricultural waste materials by a thermotolerant Streptomyces sp.", Biotechnology Letters, 23(20): 1685–1689, (2001). DOI: https://doi.org/10.1023/A:1012448229555
  • [21] Collins, T., Gerday, C., Feller, G., "Xylanases, xylanase families and extremophilic xylanases", FEMS Microbiology Reviews, 29(1): 3–23, (2005). DOI: https://doi.org/10.1016/j.femsre.2004.06.005
  • [22] Shirling, E. B., Gottlieb, D., "Methods for characterization of Streptomyces species", International Journal of Systematic Bacteriology, 16(3): 313–340, (1966).
  • [23] Williams, S.T., Goodfellow, M., Wellington, E.M.H., Vickers, J.C., Alderson, G., Sneath, P.H.A., Mortimer, A.M., “A probability matrix for identification of some Streptomycetes”, Journal of General Microbiology, 129: 1815–1830, (1983).
  • [24] Kampfer, P., Kroppenstedt, R. M., Dott, W., "A numerical classification of the genera Streptomyces and Streptoverticillium using miniaturized physiological tests", Journal of General Microbiology, 137(8): 1831–1891, (1991).
  • [25] Arai, M., Tomoda, H., Matsumoto, A., Takahashi, Y., Woodruff, B. H., Ishiguro, N., Omura, S., "Genus Streptomyces Waksman and Henrici 1943", Bergey’s Manual of Systematic Bacteriology, 4(7): 2452–2492, (1989).
  • [26] Lane, D. J., "16S/23S rRNA Sequencing", Nucleic Acid Techniques In Bacterial Systematics, John Wiley and Sons, Chichester, England, 115–175, (1991).
  • [27] Tamura, K., Stecher, G., Kumar, S., "MEGA11: Molecular Evolutionary Genetics Analysis Version 11", Molecular Biology and Evolution, 38(7): 3022–3027, (2021). DOI: https://doi.org/10.1093/molbev/msab120
  • [28] Nei, M., Naruya, S., "The Neighbor-joining Method: A New Method for Reconstructing Phylogenetic Trees", Molecular Biology and Evolution, 4(4): 406–425, (1987).
  • [29] Jukes, T. H., Cantor, C. R., “Evolution of Protein Molecules. Mammalian Protein Metabolism”, 3: 21–132, (1969).
  • [30] Felstein, J., "Confidence Limits on Phylogenies : An Approach Using the Bootstrap", Evolution, 39(4): 783–791, (1985).
  • [31] Azeri, C., Tamer, A. U., Oskay, M., "Thermoactive cellulase-free xylanase production from alkaliphilic Bacillus strains using various agro-residues and their potential in biobleaching of kraft pulp", African Journal of Biotechnology, 9(1): 063–072, (2010).
  • [32] Lan Pham, P., Taillandier, P., Delmas, M., Strehaiano, P., "Production of xylanases by Bacillus polymyxa using lignocellulosic wastes", Industrial Crops and Products, 7(2–3): 195–203, (1998). DOI: https://doi.org/10.1016/S0926-6690(97)00048-4
  • [33] Dyshlyuk, L., Ulrikh, E., Agafonova, S., Kazimirchenko, O., "Xylooligosaccharides from Biomass Lignocellulose: Properties, Sources and Production Methods", Reviews in Agricultural Science, 12: 1–12, (2024). DOI: https://doi.org/10.7831/ras.12.0_1
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  • [35] Kim, J. H., Chi, W. J., "Molecular and Biochemical Characterization of Xylanase Produced by Streptomyces viridodiastaticus MS9, a Newly Isolated Soil Bacterium", Journal of Microbiology and Biotechnology, 34(1): 176–184, (2024). DOI: https://doi.org/10.4014/jmb.2309.09029
  • [36] Adigüzel, A. O., Tunçer, M., "Production, Characterization and Application of a Xylanase from Streptomyces sp. AOA40 in Fruit Juice and Bakery Industries", Food Biotechnology, 30(3): 189–218, (2016). DOI: https://doi.org/10.1080/08905436.2016.1199383
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There are 52 citations in total.

Details

Primary Language English
Subjects Industrial Microbiology, Bacteriology
Journal Section Research Article
Authors

Mustafa Oskay 0000-0001-8693-5621

Early Pub Date January 3, 2025
Publication Date
Submission Date May 24, 2024
Acceptance Date December 10, 2024
Published in Issue Year 2025 Early View

Cite

APA Oskay, M. (2025). Isolation and Molecular Identification of Streptomyces tendae and its Xylanase Production Using Cost-Effective Agro‐Residues. Gazi University Journal of Science1-1. https://doi.org/10.35378/gujs.1489525
AMA Oskay M. Isolation and Molecular Identification of Streptomyces tendae and its Xylanase Production Using Cost-Effective Agro‐Residues. Gazi University Journal of Science. Published online January 1, 2025:1-1. doi:10.35378/gujs.1489525
Chicago Oskay, Mustafa. “Isolation and Molecular Identification of Streptomyces Tendae and Its Xylanase Production Using Cost-Effective Agro‐Residues”. Gazi University Journal of Science, January (January 2025), 1-1. https://doi.org/10.35378/gujs.1489525.
EndNote Oskay M (January 1, 2025) Isolation and Molecular Identification of Streptomyces tendae and its Xylanase Production Using Cost-Effective Agro‐Residues. Gazi University Journal of Science 1–1.
IEEE M. Oskay, “Isolation and Molecular Identification of Streptomyces tendae and its Xylanase Production Using Cost-Effective Agro‐Residues”, Gazi University Journal of Science, pp. 1–1, January 2025, doi: 10.35378/gujs.1489525.
ISNAD Oskay, Mustafa. “Isolation and Molecular Identification of Streptomyces Tendae and Its Xylanase Production Using Cost-Effective Agro‐Residues”. Gazi University Journal of Science. January 2025. 1-1. https://doi.org/10.35378/gujs.1489525.
JAMA Oskay M. Isolation and Molecular Identification of Streptomyces tendae and its Xylanase Production Using Cost-Effective Agro‐Residues. Gazi University Journal of Science. 2025;:1–1.
MLA Oskay, Mustafa. “Isolation and Molecular Identification of Streptomyces Tendae and Its Xylanase Production Using Cost-Effective Agro‐Residues”. Gazi University Journal of Science, 2025, pp. 1-1, doi:10.35378/gujs.1489525.
Vancouver Oskay M. Isolation and Molecular Identification of Streptomyces tendae and its Xylanase Production Using Cost-Effective Agro‐Residues. Gazi University Journal of Science. 2025:1-.