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Yıl 2020, Cilt: 2 Sayı: 2, 98 - 113, 26.08.2020
https://doi.org/10.38058/ijsl.770081

Öz

Kaynakça

  • Ali, F.S., Ismail, M., Mamoon, A. 2019. Comparative molecular identification of genus Dicentrarchus using mitochondrial genes and internal transcribed spacer region, Egyptian Journal of Aquatic Biology and Fisheries, 23(3): 371-384.
  • Amanullah, S., Saroj, A., Osae, B. A., Liu, S., Liu, H. et al. 2020. Detection of putative QTL regions associated with ovary traits in melon using SNP-CAPS markers, Scientia Horticulturae, 270: 109445.
  • Adu, G.B., Awuku, F.J., Amegbor, I.K., Haruna, A., Manigben, K.A. et al. 2019. Genetic characterization and population structure of maize populations using SSR markers, Annals of Agricultural Sciences, 64(1): 47-54.
  • Agarwal, M., Shirvastava, N., Padh, H. 2008. Advances in molecular marker techniques and their applications in plant sciences, Plant Cell Reports, 27: 617-631.
  • Apablaza, P., Brevik, Ø. J., Mjøs, S., Valdebenito, S., Ilardi, P. et al. 2015. Variable Number of Tandem Repeats (VNTR) analysis of Flavobacterium psychrophilum from salmonids in Chile and Norway, BMC Veterinary Research, 11(1): 150.
  • Asadi, A., Ebrahimi, A., Rashidi-Monfared, S., Basiri, M., Akbari-Afjani, J. 2020. Comprehensive functional analysis and mapping of SSR markers in the chickpea genome (Cicer arietinum L.), Computational Biology and Chemistry, 84: 107169.
  • Ayala-Usma, D.A., Danies, G., Myers, K., Bond, M.O., Romero-Navarro, J.A. et al. 2020. Genome-wide association study identifies single nucleotide polymorphism markers associated with mycelial growth (at 15, 20, and 25oC), mefenoxam resistance, and mating type in Phytophthora infestans, Phytopathology, 110(4): 822-833.
  • Babu, B.K., Mathur, R.K., Kumar, P.N., Ramajayam, D., Ravichandran, G. et al. 2017. Development, identification and validation of CAPS marker for SHELL trait which governs dura, pisifera and tenera fruit forms in oil palm (Elaeis guineensis Jacq.), PLoS ONE, 12(2): e0171933.
  • Bernard, A., Barreneche, T., Lheureux, F., Dirlewanger, E. 2018. Analysis of genetic diversity and structure in a worldwide walnut (Juglans regia L.) germplasm using SSR markers, PLoS ONE, 13(11): e0208021.
  • Bínová, Z., Korecký, J., Dvořák, J., Bílý, J., Zádrapová, D. et al. 2020. Genetic structure of norway spruce ecotypes studied by SSR markers, Forests, 11(1): 110.
  • Biswas, M.K., Nath, U.K., Howlader, J., Bagchi, M., Natarajan, S. et al. 2018. Exploration and exploitation of novel SSR markers for candidate transcription factor genes in Lilium species, Genes, 9: 97.
  • Cao, J., Zhou, Z., Tu, J., Cheng, S., Yao, J. et al. 2019. Genetic diversity and population structure analysis of sand pear (Pyrus pyrifolia) ‘Nakai’ varieties using SSR and AFLP markers, Notulae Botanicae Horti Agrobotanici Cluj-Napoca, 47(3): 970-979.
  • Chen, C.L., Xu, M.L., Wang, C.P., Qiao, G.X., Wang, W.W. et al. 2017. Characterization of the Lycium barbarum fruit transcriptome and development of EST-SSR markers, PLoS ONE, 12: e0187738.
  • Choudhary, K., Verma, A.K., Swaroop, S., Agrawal, N. 2015. A review on the molecular characterization of digenean parasites using molecular markers with special reference to ITS region, Helminthologia, 52(3): 167-187.
  • Collard, B.C., Mackill, D.J. 2009. Start codon targeted (SCoT) polymorphism: a simple, novel DNA marker technique for generating gene-targeted markers in plants, Plant Molecular Biology Reporter, 27(1): 86-93.
  • Csencsics, D., Brodbeck, S., Holderegger, R. 2010. Cost-Effective, species-specific microsatellite development for the endangered dwarf bulrush (Typha minima) using next-generation sequencing technology, Journal of Heredity, 101: 789-793.
  • Dumbovic, G., Forcales, S.V., Perucho, M. 2017. Emerging roles of macrosatellite repeats in genome organization and disease development, Epigenetics, 12(7): 515-526.
  • El-Fiki, A., Adly, M. 2019. Genetic variation and molecular characterization in some potato cultivars using random amplified polymorphic DNA and start codon targeted markers, Egyptian Journal of Biotechnology, 59.
  • Etminan, A., Pour-Aboughadareh, A., Mohammadi, R., Ahmadi-Rad, A., Noori, A. et al. 2016. Applicability of start codon targeted (SCoT) and inter-simple sequence repeat (ISSR) markers for genetic diversity analysis in durum wheat genotypes, Biotechnology & Biotechnological Equipment, 30(6): 1075-1081.
  • Fatai, R.B., Akinyemi, M.O., Osaiyuwu, O.H. 2020. In silico analysis of single nucleotide polymorphism in inha gene of sheep and goats, Biotechnology Journal International, 12-21.
  • Fazeli-Nasab, B., Sayyed, R.Z., Farsi, M., Ansari, S., El-Enshasy, H.A. 2020. Genetic assessment of the internal transcribed spacer region (ITS1. 2) in Mangifera indica L. landraces, Physiology and Molecular Biology of Plants, 26(1): 107-117.
  • Gasser, R.B., Hu, M., Chilton, N.B., Campbell, B.E., Jex, A.J. et al. 2006. Single-strand conformation polymorphism (SSCP) for the analysis of genetic variation, Nature protocols, 1(6): 3121.
  • Günaydın, S., Kafkas, S. Characterization of strawberry cultivars by SSR and CAPS Markers. VIII International Strawberry Symposium, 13-17 August 2016, p. 171-178.
  • Ghielmetti, G., Scherrer, S., Friedel, U., Frei, D., Suter, D. et al. 2017. Epidemiological tracing of bovine tuberculosis in Switzerland, multilocus variable number of tandem repeat analysis of Mycobacterium bovis and Mycobacterium caprae, PLoS ONE, 12(2): e0172474.
  • Gholamian, F., Etminan, A., Changizi, M., Khaghani, S., Gomarian, M. 2019. Assessment of genetic diversity in Triticum urartu Thumanjan ex Gandilyan accessions using start codon targeted polymorphism (SCoT) and CAAT-box derived polymorphism (CBDP) markers, Biotechnology & Biotechnological Equipment, 33(1): 1653-1662.
  • Grover, A., Sharma, P.C. 2016. Development and use of molecular markers: past and present, Critical Reviews in Biotechnology, 36(2): 290-302.
  • Guan, C., Chachar, S., Zhang, P., Hu, C., Wang, R. et al. 2020. Inter-and intra-specific genetic diversity in Diospyros using SCoT and IRAP markers, Horticultural Plant Journal, 6(2): 71-80.
  • Hadipour, M., Kazemitabar, S.K., Yaghini, H., Dayani, S. 2020. Genetic diversity and species differentiation of medicinal plant Persian Poppy (Papaver bracteatum L.) using AFLP and ISSR markers, Ecological Genetics and Genomics, 100058.
  • Holasou, H.A., Rahmati, F., Rahmani, F., Imani, M., Talebzadeh, Z. 2019. Elucidate genetic diversity and population structure of bread wheat (Triticum aestivum L.) cultivars using IRAP and REMAP markers, Journal of Crop Science and Biotechnology, 22(2): 139-151.
  • Hu, Y., Li, B.Q., da Jin, Z., He, L.H., Tao, X.X. et al. 2015. Identification of Variable-Number Tandem-Repeat (VNTR) sequences in Acinetobacter pittii and development of an optimized multiple-locus VNTR analysis typing scheme, Biomedical and Environmental Sciences, 28(12): 855-63.
  • Hubhachen, Z., Jiang, H., Schlipalius, D., Park, Y., Guedes, R.N. et al. 2020. A CAPS marker for determination of strong phosphine resistance in Tribolium castaneum from Brazil, Journal of Pest Science, 93(1): 127-134.
  • Imwong, M., Mathema, V. B., Nakeesathit, S., Pagornrat, W., Smithuis, F. et al. 2019. Polymorphic markers for identification of parasite population in Plasmodium malariae, Malaria Journal, 19: 48.
  • Ismail, N.A., Rafii, M.Y., Mahmud, T.M.M., Hanafi, M.M., Miah, G. 2019. Genetic diversity of torch ginger (Etlingera elatior) germplasm revealed by ISSR and SSR markers, BioMed Research International, doi: 10.1155/2019/5904804.
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  • Shehata, M.M., Fahmy, E.M., Mohamed Badawy, F., Mostafa Kamal Sayed, L. 2020. Measuring of the alteration of retrotransposition in the response of salinity stress using IRAP and SCoT markers, Arab Universities Journal of Agricultural Sciences, doi: s10.21608/ajs.2019.18888.1107
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Application of different molecular markers in biotechnology

Yıl 2020, Cilt: 2 Sayı: 2, 98 - 113, 26.08.2020
https://doi.org/10.38058/ijsl.770081

Öz

Several molecular markers have been developed to explore genetic diversity, resistance against biotic/abiotic stress, disease, biomarker and evolutionary relationships in different genomes. These markers could be classified as sequence, hybridisation, PCR and retrotransposon based techniques. In this study, procedure and applications of AFLP (Amplified Fragment Length Polymorphism), ITS (Internal Transcribed Spacer), IRAP (Inter Retrotransposon Amplified Polymorphism), SSR (Simple Sequence Repeats), VNTR (Variable Number Tandem Repeats), SNP (single nucleotide polymorphism), CAPS (Cleaved Amplified Polymorphic Sequences), SCoT (Start Codon Targeted Polymorphism), SSCP (Single Strand Conformational Polymorphism) markers in plant, animal and human genomes were discussed.

Kaynakça

  • Ali, F.S., Ismail, M., Mamoon, A. 2019. Comparative molecular identification of genus Dicentrarchus using mitochondrial genes and internal transcribed spacer region, Egyptian Journal of Aquatic Biology and Fisheries, 23(3): 371-384.
  • Amanullah, S., Saroj, A., Osae, B. A., Liu, S., Liu, H. et al. 2020. Detection of putative QTL regions associated with ovary traits in melon using SNP-CAPS markers, Scientia Horticulturae, 270: 109445.
  • Adu, G.B., Awuku, F.J., Amegbor, I.K., Haruna, A., Manigben, K.A. et al. 2019. Genetic characterization and population structure of maize populations using SSR markers, Annals of Agricultural Sciences, 64(1): 47-54.
  • Agarwal, M., Shirvastava, N., Padh, H. 2008. Advances in molecular marker techniques and their applications in plant sciences, Plant Cell Reports, 27: 617-631.
  • Apablaza, P., Brevik, Ø. J., Mjøs, S., Valdebenito, S., Ilardi, P. et al. 2015. Variable Number of Tandem Repeats (VNTR) analysis of Flavobacterium psychrophilum from salmonids in Chile and Norway, BMC Veterinary Research, 11(1): 150.
  • Asadi, A., Ebrahimi, A., Rashidi-Monfared, S., Basiri, M., Akbari-Afjani, J. 2020. Comprehensive functional analysis and mapping of SSR markers in the chickpea genome (Cicer arietinum L.), Computational Biology and Chemistry, 84: 107169.
  • Ayala-Usma, D.A., Danies, G., Myers, K., Bond, M.O., Romero-Navarro, J.A. et al. 2020. Genome-wide association study identifies single nucleotide polymorphism markers associated with mycelial growth (at 15, 20, and 25oC), mefenoxam resistance, and mating type in Phytophthora infestans, Phytopathology, 110(4): 822-833.
  • Babu, B.K., Mathur, R.K., Kumar, P.N., Ramajayam, D., Ravichandran, G. et al. 2017. Development, identification and validation of CAPS marker for SHELL trait which governs dura, pisifera and tenera fruit forms in oil palm (Elaeis guineensis Jacq.), PLoS ONE, 12(2): e0171933.
  • Bernard, A., Barreneche, T., Lheureux, F., Dirlewanger, E. 2018. Analysis of genetic diversity and structure in a worldwide walnut (Juglans regia L.) germplasm using SSR markers, PLoS ONE, 13(11): e0208021.
  • Bínová, Z., Korecký, J., Dvořák, J., Bílý, J., Zádrapová, D. et al. 2020. Genetic structure of norway spruce ecotypes studied by SSR markers, Forests, 11(1): 110.
  • Biswas, M.K., Nath, U.K., Howlader, J., Bagchi, M., Natarajan, S. et al. 2018. Exploration and exploitation of novel SSR markers for candidate transcription factor genes in Lilium species, Genes, 9: 97.
  • Cao, J., Zhou, Z., Tu, J., Cheng, S., Yao, J. et al. 2019. Genetic diversity and population structure analysis of sand pear (Pyrus pyrifolia) ‘Nakai’ varieties using SSR and AFLP markers, Notulae Botanicae Horti Agrobotanici Cluj-Napoca, 47(3): 970-979.
  • Chen, C.L., Xu, M.L., Wang, C.P., Qiao, G.X., Wang, W.W. et al. 2017. Characterization of the Lycium barbarum fruit transcriptome and development of EST-SSR markers, PLoS ONE, 12: e0187738.
  • Choudhary, K., Verma, A.K., Swaroop, S., Agrawal, N. 2015. A review on the molecular characterization of digenean parasites using molecular markers with special reference to ITS region, Helminthologia, 52(3): 167-187.
  • Collard, B.C., Mackill, D.J. 2009. Start codon targeted (SCoT) polymorphism: a simple, novel DNA marker technique for generating gene-targeted markers in plants, Plant Molecular Biology Reporter, 27(1): 86-93.
  • Csencsics, D., Brodbeck, S., Holderegger, R. 2010. Cost-Effective, species-specific microsatellite development for the endangered dwarf bulrush (Typha minima) using next-generation sequencing technology, Journal of Heredity, 101: 789-793.
  • Dumbovic, G., Forcales, S.V., Perucho, M. 2017. Emerging roles of macrosatellite repeats in genome organization and disease development, Epigenetics, 12(7): 515-526.
  • El-Fiki, A., Adly, M. 2019. Genetic variation and molecular characterization in some potato cultivars using random amplified polymorphic DNA and start codon targeted markers, Egyptian Journal of Biotechnology, 59.
  • Etminan, A., Pour-Aboughadareh, A., Mohammadi, R., Ahmadi-Rad, A., Noori, A. et al. 2016. Applicability of start codon targeted (SCoT) and inter-simple sequence repeat (ISSR) markers for genetic diversity analysis in durum wheat genotypes, Biotechnology & Biotechnological Equipment, 30(6): 1075-1081.
  • Fatai, R.B., Akinyemi, M.O., Osaiyuwu, O.H. 2020. In silico analysis of single nucleotide polymorphism in inha gene of sheep and goats, Biotechnology Journal International, 12-21.
  • Fazeli-Nasab, B., Sayyed, R.Z., Farsi, M., Ansari, S., El-Enshasy, H.A. 2020. Genetic assessment of the internal transcribed spacer region (ITS1. 2) in Mangifera indica L. landraces, Physiology and Molecular Biology of Plants, 26(1): 107-117.
  • Gasser, R.B., Hu, M., Chilton, N.B., Campbell, B.E., Jex, A.J. et al. 2006. Single-strand conformation polymorphism (SSCP) for the analysis of genetic variation, Nature protocols, 1(6): 3121.
  • Günaydın, S., Kafkas, S. Characterization of strawberry cultivars by SSR and CAPS Markers. VIII International Strawberry Symposium, 13-17 August 2016, p. 171-178.
  • Ghielmetti, G., Scherrer, S., Friedel, U., Frei, D., Suter, D. et al. 2017. Epidemiological tracing of bovine tuberculosis in Switzerland, multilocus variable number of tandem repeat analysis of Mycobacterium bovis and Mycobacterium caprae, PLoS ONE, 12(2): e0172474.
  • Gholamian, F., Etminan, A., Changizi, M., Khaghani, S., Gomarian, M. 2019. Assessment of genetic diversity in Triticum urartu Thumanjan ex Gandilyan accessions using start codon targeted polymorphism (SCoT) and CAAT-box derived polymorphism (CBDP) markers, Biotechnology & Biotechnological Equipment, 33(1): 1653-1662.
  • Grover, A., Sharma, P.C. 2016. Development and use of molecular markers: past and present, Critical Reviews in Biotechnology, 36(2): 290-302.
  • Guan, C., Chachar, S., Zhang, P., Hu, C., Wang, R. et al. 2020. Inter-and intra-specific genetic diversity in Diospyros using SCoT and IRAP markers, Horticultural Plant Journal, 6(2): 71-80.
  • Hadipour, M., Kazemitabar, S.K., Yaghini, H., Dayani, S. 2020. Genetic diversity and species differentiation of medicinal plant Persian Poppy (Papaver bracteatum L.) using AFLP and ISSR markers, Ecological Genetics and Genomics, 100058.
  • Holasou, H.A., Rahmati, F., Rahmani, F., Imani, M., Talebzadeh, Z. 2019. Elucidate genetic diversity and population structure of bread wheat (Triticum aestivum L.) cultivars using IRAP and REMAP markers, Journal of Crop Science and Biotechnology, 22(2): 139-151.
  • Hu, Y., Li, B.Q., da Jin, Z., He, L.H., Tao, X.X. et al. 2015. Identification of Variable-Number Tandem-Repeat (VNTR) sequences in Acinetobacter pittii and development of an optimized multiple-locus VNTR analysis typing scheme, Biomedical and Environmental Sciences, 28(12): 855-63.
  • Hubhachen, Z., Jiang, H., Schlipalius, D., Park, Y., Guedes, R.N. et al. 2020. A CAPS marker for determination of strong phosphine resistance in Tribolium castaneum from Brazil, Journal of Pest Science, 93(1): 127-134.
  • Imwong, M., Mathema, V. B., Nakeesathit, S., Pagornrat, W., Smithuis, F. et al. 2019. Polymorphic markers for identification of parasite population in Plasmodium malariae, Malaria Journal, 19: 48.
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  • Jasim Aljumaili, S., Rafii, M. Y., Latif, M. A., Sakimin, S. Z., Arolu, I. W. et al. 2018. Genetic diversity of aromatic rice germplasm revealed by SSR markers. BioMed Research International, doi: 10.1155/2018/7658032.
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  • Kuhn, D.N., Dillon, N., Bally, I., Groh, A., Rahaman, J. et al. 2019. Estimation of genetic diversity and relatedness in a mango germplasm collection using SNP markers and a simplified visual analysis method, Scientia Horticulturae, 252: 156-168.
  • Lancíková, V., Žiarovská, J. 2020. Inter-retrotransposon amplified polymorphism markers revealed long terminal repeat retrotransposon insertion polymorphism in flax cultivated on the experimental fields around Chernobyl, Journal of Environmental Science and Health, Part A Toxic/Hazardous Substances and Environmental Engineering 55(8): 957-963.
  • Lee, S.Y., Mohamed, R., Faridah-Hanum, I., Lamasudin, D.U. 2017. Utilization of the internal transcribed spacer (ITS) DNA sequence to trace the geographical sources of Aquilaria malaccensis Lam. Populations, Plant Genetic Resources, 16(2): 103-111.
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  • Li, S., Deng, Y., Wang, Z., Zhang, Z., Kong, X. et al. 2020. Exploring the accuracy of amplicon‐based internal transcribed spacer markers for a fungal community, Molecular Ecology Resources, 20(1): 170-184.
  • Li, X., Tang, Y., Zhang, R., Tian, F., Zhao, K. 2020. Characterization and development of SSR markers of schizothoracine fish (Cypriniformes: Cyprinidae) based on SLAF‐seq Technique, Journal of Applied Ichthyology, doi: 10.1111/jai.14032.
  • Liu, Z., Yin, X., Mai, H., Li, G., Lin, Z. et al. 2020. SCD rs41290540 single‐nucleotide polymorphism modifies miR‐498 binding and is associated with a decreased risk of coronary artery disease, Molecular Genetics & Genomic Medicine, 8(3): e1136.
  • Ma, S.L.Y., Dong, W.S., Lyu, T., Lyu, Y.M. 2019. An RNA sequencing transcriptome analysis and development of EST-SSR markers in Chinese hawthorn through Illumina sequencing, Forests, 10: 82.
  • Moya-Hernández, A., Bosquez-Molina, E., Serrato-Díaz, A., Blancas-Flores, G., Alarcón-Aguilar, F.J. 2018. Analysis of genetic diversity of Cucurbita ficifolia Bouché from different regions of Mexico, using AFLP markers and study of its hypoglycemic effect in mice, South African Journal of Botany, 116: 110-115.
  • Nadeem, M. A., Nawaz, M. A., Shahid, M. Q., Doğan, Y., Comertpay, G. et al. 2018. DNA molecular markers in plant breeding: current status and recent advancements in genomic selection and genome editing, Biotechnology & Biotechnological Equipment, 32(2): 261-285.
  • Najar-Peerayeh, S., Karmostaji, A. 2019. Evaluation of multilocus Variable-Number Tandem-Repeat (MLVA-8 Orsay) for Typing of carbapenem-resistant Acinetobacter baumannii isolated from patients in Tehran, Iran, Archives of Clinical Infectious Diseases, 14(1): e64402s
  • Noormohammadi, Z., Ibrahim-Khalili, N., Sheidai, M., Alishah, O. 2018. Genetic fingerprinting of diploid and tetraploid cotton cultivars by retrotransposon-based markers, The Nucleus, 61(2): 137-143.
  • Ovesná, J., Russo, D., Frescura, D., Cusimamani, E.F., Svobodova, E. et al. 2018. Assessment of genetic diversity of Smallanthus sonchifolius (Poepp. & Endl.) h. Robinson landraces by using AFLP markers, Genetika, 50(3): 803-816.
  • Pai, T.W., Chen, C. M. 2016. SSRs as genetic markers in the human genome and their observable relationship to hereditary diseases, Biomarkers in Medicine, 10(6): 563-566.
  • Paun, O., Schönswetter, P. 2012. Amplified fragment length polymorphism: an invaluable fingerprinting technique for genomic, transcriptomic, and epigenetic studies. In: Sucher, N.J., Hennell, J.R., Carles, M.C. (Eds.). Plant DNA Fingerprinting and Barcoding. pp. 75-87, Humana Press.
  • Perkel, J. 2008. SNP genotyping: six technologies that keyed a revolution, Nature Methods, 5(5): 447-453.
  • Pourahmad, F., Adams, A., Thompson, K.D., Richards, R.H. 2019. Identification of aquatic mycobacteria based on sequence analysis of the 16S-23S rRNA internal transcribed spacer region, Journal of Medical Microbiology, 68(2): 221-229.
  • Rocha, G.M., Martinelli, A.B., Utz, L.R.P., Fernandes, L.F.L. 2019. Using internal transcribed spacers for Calanoida (Crustacea, Copepoda) species identification, Marine Biodiversity, 49(3): 1565-1571.
  • Shehata, M.M., Fahmy, E.M., Mohamed Badawy, F., Mostafa Kamal Sayed, L. 2020. Measuring of the alteration of retrotransposition in the response of salinity stress using IRAP and SCoT markers, Arab Universities Journal of Agricultural Sciences, doi: s10.21608/ajs.2019.18888.1107
  • Shekhawat, J.K., Rai, M.K., Shekhawat, N.S., Kataria, V. 2018. Exploring genetic variability in Prosopis cineraria using two gene targeted CAAT box-derived polymorphism (CBDP) and start codon targeted (SCoT) polymorphism markers, Molecular Biology Reports, 45(6): 2359-2367.
  • Shibeshi, S., Adetimirin, V.O., Kumar, L., Abebe, M., Gedil, M. 2020. Verification of single nucleotide polymorphism (SNP) markers associated with maize (Zea mays. L) streak virus resistance in early generation maize lines, International Journal of Genetics and Molecular Biology, 12(1): 36-45.
  • Shingote, P.R., Mithra, S.A., Sharma, P., Devanna, N.B., Arora, K. et al. 2019. LTR retrotransposons and highly informative ISSRs in combination are potential markers for genetic fidelity testing of tissue culture-raised plants in sugarcane, Molecular Breeding, 39(2): 25.
  • Silva Junior, M.S.F.S.D., Borges, A.A.D.S., Santos, S.R.N., Moura, V.G.D., Silvana, G.R.D. et al. 2020. SSR and ISSR markers in assessing genetic diversity in Gallus gallus domesticus: a quantitative analysis of scientific production, Ciência Rural, 50(7): e20190401.
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  • Taheri, S., Lee Abdullah, T., Yusop, M., Hanafi, M., Sahebi, M. et al. 2018. Mining and development of novel SSR markers using Next Generation Sequencing (NGS) Data in Plants, Molecules, 23(2): 399.
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  • Thumilan, B.M., Sajeevan, R.S., Madhuri, B.J.T., Nataraja, K.N., Sreeman, S.M. 2016. Development and characterization of genic SSR markers from Indian mulberry transcriptome and their transferability to related species of Moraceae, PLoS ONE, 11: e0162909.
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  • Vuylsteke, M., Peleman, J.D., Van Eijk, M.J. 2007. AFLP technology for DNA fingerprinting, Nature Protocols, 2(6): 1387.
  • Wei, N.W.V., Wallace, C.C., Dai, C.F., Pillay, K.M., Chen, C.A. 2006. Analyses of the ribosomal Internal Transcribed Spacers (ITS) and 5.8 S gene indicate that extremely high rDNA heterogeneity is a unique feature in the scleractinian coral genus Acropora (Scleractinia; Acroporidae), Zoological Studies, 45(3): 404.
  • Xiao, P., Liu, H., Wang, D., Tang, W., Yang, H. et al. 2020. Assessment of genetic diversity in Camellia oleifera Abel. accessions using inter-simple sequence repeat (ISSR) and start codon targeted (SCoT) polymorphic markers, Genetic Resources and Crop Evolution, 67: 1115-1124.
  • Xu, D., Chen, H., Aci, M., Pan, Y., Shangguan, Y. et al. 2018. De novo assembly, characterization and development of EST-SSRs from Bletilla striata transcriptomes profiled throughout the whole growing period, PLoS ONE, 13: e0205954.
  • Youssef, S.A., Shalaby, A.A. 2016. Single-Strand Conformation Polymorphism (SSCP) and nucleotide sequence analysis of Citrus tristeza virus in Egypt, International Journal of Advanced Research in Biological Science, 3(5): 84-92.
  • Yu, J., Zhou, T., Zhu, B., Wei, Y., Li, X. et al. 2020. Species-specific identification of Streptococcus based on DNA marker in 16S-23S rDNA internal transcribed spacer, Current Microbiology, 77, 1569-1579.
  • Zafar, S., Tang, M.Q., Wang, Y.K., Sarwar, R., Liu, S.Y. et al. 2020. Candidate genes-association study to identify loci related to oleic acid in Brassica napus using SNP markers and their heterologous expression in yeast, Plant Physiology and Biochemistry, 146: 294-302.
  • Zhao, J., Xu, Z., Chen, A., You, X., Zhao, Y. et al. 2019. Identification of meat from yak and cattle using SNP markers with integrated allele-specific polymerase chain reaction–capillary electrophoresis method, Meat Science, 148: 120-126.
  • Zheng, X., Yang, S., Zhang, D., Zhong, Z., Tang, X. et al. 2016. Effective screen of CRISPR/Cas9-induced mutants in rice by single-strand conformation polymorphism, Plant Cell Reports, 35(7): 1545-1554.
Toplam 76 adet kaynakça vardır.

Ayrıntılar

Birincil Dil İngilizce
Bölüm Review
Yazarlar

Berna Kocaman 0000-0002-5578-8697

Sevim Toy Bu kişi benim 0000-0002-6624-3182

Sevgi Maraklı 0000-0001-5796-7819

Yayımlanma Tarihi 26 Ağustos 2020
Yayımlandığı Sayı Yıl 2020 Cilt: 2 Sayı: 2

Kaynak Göster

APA Kocaman, B., Toy, S., & Maraklı, S. (2020). Application of different molecular markers in biotechnology. International Journal of Science Letters, 2(2), 98-113. https://doi.org/10.38058/ijsl.770081
AMA Kocaman B, Toy S, Maraklı S. Application of different molecular markers in biotechnology. IJSL. Ağustos 2020;2(2):98-113. doi:10.38058/ijsl.770081
Chicago Kocaman, Berna, Sevim Toy, ve Sevgi Maraklı. “Application of Different Molecular Markers in Biotechnology”. International Journal of Science Letters 2, sy. 2 (Ağustos 2020): 98-113. https://doi.org/10.38058/ijsl.770081.
EndNote Kocaman B, Toy S, Maraklı S (01 Ağustos 2020) Application of different molecular markers in biotechnology. International Journal of Science Letters 2 2 98–113.
IEEE B. Kocaman, S. Toy, ve S. Maraklı, “Application of different molecular markers in biotechnology”, IJSL, c. 2, sy. 2, ss. 98–113, 2020, doi: 10.38058/ijsl.770081.
ISNAD Kocaman, Berna vd. “Application of Different Molecular Markers in Biotechnology”. International Journal of Science Letters 2/2 (Ağustos 2020), 98-113. https://doi.org/10.38058/ijsl.770081.
JAMA Kocaman B, Toy S, Maraklı S. Application of different molecular markers in biotechnology. IJSL. 2020;2:98–113.
MLA Kocaman, Berna vd. “Application of Different Molecular Markers in Biotechnology”. International Journal of Science Letters, c. 2, sy. 2, 2020, ss. 98-113, doi:10.38058/ijsl.770081.
Vancouver Kocaman B, Toy S, Maraklı S. Application of different molecular markers in biotechnology. IJSL. 2020;2(2):98-113.