BibTex RIS Kaynak Göster

Experimental and Theoretical Investigation of Molecular Structure and Vibrational Frequencies of 3-Cyano-7-hydroxycoumarin by Density Functional Theory

Yıl 2017, Cilt: 21 Sayı: 3, 767 - 773, 15.08.2017
https://doi.org/10.19113/sdufbed.09372

Öz

In this research, geometrical structure and vibrational spectra of 3-cyano-7-hydroxycoumarin (3C7HC) were studied experimentally and theoretically. Experimentally, FT-IR (infrared) and FT-R (Raman) spectra of 3C7HC molecule were respectively obtained in the range of 4000-400 cm-1 and 3500-100 cm-1. Theoretically, the optimized geometric structures, vibrational spectra and corresponding assignments according to two possible configurations of the 3C7HC molecule were investigated using the density functional method (B3LYP) with 6-311++G (d,p) basis set. When analyzes were performed, CS symmetry property of 3C7HC molecule was used. It was seen that the experimental and calculated data of the 3C7HC molecule were highly compatible with each other.

Kaynakça

  • [1] Symeonidis, T., Chamilos, M., Hadjipavlou-Litina, D. J., Kallitsakis, M., Litinas, K. E. 2009. Synthesis of hydroxycoumarins and hydroxybenzo[f] or [h]coumarins as lipid peroxidation inhibitors. Bioorg. Med. Chem. Lett., 19(4) (2009), 1139-1142.
  • [2] Venugopala, K. N., Jayashree, B. S. 2008. Microwave-induced synthesis of Schiff bases of aminothiazolylbromocoumarins as antibacterials. Indian J. Pharm. Sci., 70(1) (2008), 88–91.
  • [3] Campos-Toimil, M., Orallo, F., Santana, L., Uriarte, E. 2002. Synthesis and vasorelaxant activity of new coumarin and furocoumarinderivatives. Bioorg. Med. Chem. Lett., 12(5) (2002), 783-786.
  • [4] Satyanarayana, S. V., Sreevani, P., Sivakumar, A., Vijayakumar, V. 2008. Synthesis and antimicrobial activity of new Schiff bases containing coumarin moiety and their spectral characterization. Arkivoc, 17(2008), 221-233.
  • [5] Hwu, J. R., Singha, R., Hong, S. C., Chang, Y. H., Das, A. R., Vliegen, I., De Clercq, E., Neyts, J. 2008. Synthesis of new benzimidazole-coumarin conjugates as anti-hepatitis C virus agents. Antiviral Res., 77(2) (2008), 157-162.
  • [6] Daly, A. K. 2009. Pharmacogenomics of anticoagulants: steps toward personal dosage. Genome Med., 1(1), 10-14.
  • [7] Anderson, D, M., Shelley, S., Crick, N., Buraglio, M. 2002. No effect of the novel antidiabetic agent nateglinide on the pharmacokinetics and anticoagulant properties of warfarin in healthy volunteers. J. Clin. Pharmacol., 42(12)(2002), 1358-1365.
  • [8] Chattha, F. A., Munawar, M. A., Nisa, M., Ashraf, M., Kousar, S., Arshad, S. 2015. Potential antibacterial activity of coumarin and coumarin-3-acetic acid derivatives. Pakistan Journal of Pharmaceutical Science, 28(3) (2015), 819-823.
  • [9] Timonen, J. M., Nieminen, R. M., Sareila, O., Goulas, A., Moilanen,L. J., Haukka, M., Vainiotalo, P., Moilanen, E., Aulaskari, P. H. 2011. Synthesis and anti-inflammatory effects of a series of novel 7-hydroxycoumarin derivatives. European Journal of Medicinal Chemistry, 46(2011), 3845-3850
  • [10] Bhattacharyya, S. S., Paul, S., Mandal, S. K., Banerjee, A., Boujedaini, N., Khuda-Bukhsh, A. R. 2009. A synthetic coumarin (4-methyl-7 hydroxycoumarin) has anti-cancer potentials against DMBA-induced skin cancer in mice. European Journal of Pharmacology, 614(2009), 128-136.
  • [11] KinzaAslam K., Khosa M. K., Jahan, N., Nosheen, S. 2010. Synthesis and applications of coumarin. Pakistan Journal of Pharmaceutical Science, 23(4) (2010), 449-454.
  • [12] Maheswara, M., Siddaiah, V., Damu, G. L., Rao, Y. K., Rao, C. V. 2006. A solvent-free synthesis of coumarins via Pechmann condensation using heterogeneous catalyst. Journal of Molecular Catalysis A Chemical, 255(2006), 49-52.
  • [13] Zabrandik, M.1992. The production and application of fluorecent brightening agents. John Wiley & Sons, New York.
  • [14] Divyesh, P., Kumari, P., Patel, N. 2010. Synthesis characterization and biological avaluation of some thiazolidinone derivatives as antimicrobial agents. Journal of Chemical and Pharmaceutical Research, 2(5) (2010), 84-91.
  • [15] Udaya Sri, N., Chaitanya, K., Prasad, M. V. S., Veeraiah, V., Veeraiah, A. 2012. FT-IR, FT-Raman and UV–Vis spectra and DFT calculations of 3-cyano-4-methylcoumarin. SpectrochimcaActa Part A, Molecular and Biomolecular Spectroscopy, 97(2012), 728–736.
  • [16] Sebastian, S., Sylvestre, S., Jayarajan, D., Amalanathan, M., Oudayakumar,K., Gnanapoongothai, T., Jayavarthanan, T. 2013. Molecular structure, normal coordinate analysis, harmonic vibrational frequencies, natural bond orbital, TD-DFT calculations and biological activity analysis of antioxidant drug 7-hydroxycoumarin. Spectrochimica Acta Part A, Molecular and Biomolecular Spectroscopy, 101(2013), 370-381.
  • [17] Sortur, V., Yenagi, J., Tonannavar, J., Jadhav, V. B., Kulkarni, M. V.. 2006. Fourier transform-infrared and Raman spectra, ab initio calculations and assignments for 6-methyl-4-bromomethylcoumarin. Spectrochimica Acta A, Molecular and Biomolecular Spectroscopy, 64(2006), 301-307.
  • [18] Dereli, Ö., 2016. Molecular Structure and Spectral (FT-IR, Raman) Investigations of 3-Aminocoumarin. Optics and Spectroscopy Journal, 120(2016), 690-700.
  • [19] Arjunan, V., Sakiladevi, S., Marchewka, M, K., Mohan, S. 2013. FTIR, FT-Raman, FT-NMR and quantum chemical investigations of 3-acetylcoumarin. Spectrochimica Acta A, Molecular and Biomolecular Spectroscopy, 109(2013), 79-89.
  • [20] Tonannavar, J., Yenagi, J., Sortur, V., Jadhav, V. B., Kulkarni, M. V. 2010. Vibrational spectra, normal modes, abinitio and DFT calculations for 6-Chloro- and 7-Chloro-4-bromomethylcoumarins. Spectrochimica Acta A, 77(2010), 351-358.
  • [21] Warde, U., Sekar N. 2017. Solvatochromicbenzo[h] coumarins: Synthesis, solvatochromism. Optical Materials Journal, 72 (2017), 346-358.
  • [22] Sarıkaya, E. K., Dereli, Ö.,Erdoğdu, Y., Güllüoğlu, M.T. 2012. Molecular structure and vibrational spectra of 7-Etoxycoumarin by density functional metohod. Jounal of Molecular Structure, 1049(2012) 220-226.
  • [23] Joseph, L., Sajan, D., Reshmy, R., ArunSasi,B. S., Erdogdu, Y., Kurien Thomas, K. 2012. Vibrational spectra, structural conformations, scaled quantum chemical calculations and NBO analysis of 3-acetyl-7-methoxycoumarin. Spectrochimica Acta Part A, Molecular and Biomolecular Spectroscopy, 99 (2012) 234-247.
  • [24] Moghanian, H., Mobinikhaledi, A., Monjezi, R. 2013. Synthesis, spectroscopy (vibrational, NMR and UV–vis) studies, HOMO–LUMO and NBO analysis of 8-formyl-7-hydroxy-4-methylcoumarin by ab initio calculations. Journal of Molecular Structure 1052(2013), 135-145.
  • [25] Frisch, M. J., Trucks, G. W., Schlegel, H.B., Scuseria, G. E., Robb, M.A., Cheeseman, J. R., Montgomery Jr, J. A., Vreven, T., Kudin, K. N., Burant, J. C., Millam, J. M., Iyengar, S. S., Tomasi, J., Barone, V., Mennucci, B., Cossi, M., Scalmani, G., Rega, N., Petersson, G. A., Nakatsuji, H., Hada, M., Ehara, M., Toyota, K., Fukuda, R., Hasegawa, J., Ishida, M., Nakajima, T., Honda, Y., Kitao, O., Nakai, H., Klene, M., Li, X.,Knox, J. E., Hratchian, H. P., Cross, J. B., C., Adamo, Jaramillo, J., Gomperts, R., Stratmann, R. E., Yazyev, O., Austin, A. J., Cammi, R., Pomelli, C., Ochterski, J. W., Ayala, P. Y., Morokuma K., Voth, G. A., Salvador, P., Dannenberg, J. J., Zakrzewski, V. G., Dapprich, S., Daniels, A. D., Strain, M. C., Farkas, O., Malick, D. K., Foresman, J.B., Ortiz, J.V., Cui, Q., Baboul, A.G., Foresman, J. B., Ortiz, J.V., Cui, Q., Baboul, A.G., Clifford, S., Rabuck, A.D., Raghavachari, K., Cioslowski, J., Stefanov, B. B., Liu, G., Liashenko, A., Piskorz, P., Komaromi, I., Martin, R. L., Fox, D. J., Keith, T., Al-Laham, M. A., Peng, C. Y., Nanayakkara, A., M. Challacombe, Gill, P. M. W., Johnson, B., Chen, W. Wong, M. W., Gonzalez, C., Pople, J. A. 2003. GAUSSIAN 03, Revision C.02, Gaussian Inc., Pittsburgh, PA.
  • [26] Frish, A., Nielsen, A. B., Holder, A. J. 2001. Gauss View User Manual, Gaussian Inc. Pittsburg, PA.
  • [27] Young, D. C. 2001. Computional Chemistry. A Pratical Guide for Applying Techniques to Real-World Problems, (Electronics). John Wiley & Sons, New York.
  • [28] Ueno, K. 1985. Structures of umbelliferone and 7-ethoxycoumarin. Acta Crystallographica, C41 (1985), 1786-1789.
  • [29] Vijayalakshmi, L., Parthasarathi, V., Varu, B., Shah, A. 2001. 3-Cyano-4-[2-(4-methyl¬thio-phenyl)-ethenyl]-2H-1-benzo-pyran-2-one. Acta Crystallographica, E57 (2001), o436-438.
  • [30] Wilson, E.B., Decius, J.C., Cross, P.C. 1980. Molecular vibrations, Dover Pub., New York.
  • [31] Varsanyi, G., Szoke S. 1969. Vibrational spectra of benzene derivatives. Academic press, New York.
  • [32] Du, X., Guo C., Hansell, E., Doyle, P. S., Caffrey, C. R., Holler, T. P., McKerrow , J. H., Cohen, F. E. 2002. Synthesis and structure-activity relationship study of potent trypanocidalthiosemicarbazone inhibitors of the trypanosomal cysteine protease cruzain. J. Med. Chem., 45(13) (2002), 2695-2707.
  • [33] Smith, B. C. 1998. Infrared spectral interpretation: A Systematic Approach. CRC Press, Boca Raton, Florida.
  • [34] Socrates, G. 2004. Infrared and Raman characteristic group frequencies: tables and charts, Wiley.
  • [35] Vein, D. L., Colthup, N.B., Fateley, W.G., Grasselli, J. 1991. The Handbook of IR and Raman characteristic frequencies of organic molecules. Academic Press, New York.
  • [36] Colthup, N. B., Daly, L. H., Wiberly, S. E. 1990. Introduction to Infrared and Raman spectroscopy, Academic Press, New York.
  • [37] Ucun, F., Güçlü, V., Sağlam, A. 2008. Ab initio Hartree-Fock and density functional theory study on molecular structures, energies, and vibrational frequencies of conformations of 2-hydroxy-3-nitropyridine and 3-hydroxy-2-nitropyridine. Spectrochimica Acta Part A, Molecular and Biomolecular Spectroscopy, 70(2008), 524-531.
  • [38] Sajan, D., Erdoğdu, Y., Reshmy, R., Dereli, Ö., Kurien Thomas, K. K., Hubert Joe, I. 2011. DFT-based molecular modeling, NBO analysis and vibrational spectroscopic study of 3-(bromoacetyl)coumarin. Spectrochimica Acta Part A, Molecular and Biomolecular Spectroscopy, 82(2011), 118-125.
  • [39] Sebastian, S., Sundaraganesan, N., Karthikeiyan, B., Srinivasan, V. 2011. Quantum mechanical study of the structure and spectroscopic (FT-IR, FT-Raman, 13C, 1H and UV), first order hyperpolarizabilities, NBO and TD-DFT analysis of the 4-methyl-2-cyanobiphenyl Spectrochimica Acta A, Molecular and Biomolecular Spectroscopy, 78(2011), 590-600.
  • [40] Erdoğdu, Y. 2013. Investigations of FT-IR, FT-Raman, FT-NMR spectra and quantum chemical computations of Esculetin molecule. Spectrochimica Acta A, Molecular and Biomolecular Spectroscopy, 106(2013), 25-33.
Toplam 40 adet kaynakça vardır.

Ayrıntılar

Bölüm Makaleler
Yazarlar

Adnan Sağlam

Yayımlanma Tarihi 15 Ağustos 2017
Yayımlandığı Sayı Yıl 2017 Cilt: 21 Sayı: 3

Kaynak Göster

APA Sağlam, A. (2017). Experimental and Theoretical Investigation of Molecular Structure and Vibrational Frequencies of 3-Cyano-7-hydroxycoumarin by Density Functional Theory. Süleyman Demirel Üniversitesi Fen Bilimleri Enstitüsü Dergisi, 21(3), 767-773. https://doi.org/10.19113/sdufbed.09372
AMA Sağlam A. Experimental and Theoretical Investigation of Molecular Structure and Vibrational Frequencies of 3-Cyano-7-hydroxycoumarin by Density Functional Theory. Süleyman Demirel Üniv. Fen Bilim. Enst. Derg. Aralık 2017;21(3):767-773. doi:10.19113/sdufbed.09372
Chicago Sağlam, Adnan. “Experimental and Theoretical Investigation of Molecular Structure and Vibrational Frequencies of 3-Cyano-7-Hydroxycoumarin by Density Functional Theory”. Süleyman Demirel Üniversitesi Fen Bilimleri Enstitüsü Dergisi 21, sy. 3 (Aralık 2017): 767-73. https://doi.org/10.19113/sdufbed.09372.
EndNote Sağlam A (01 Aralık 2017) Experimental and Theoretical Investigation of Molecular Structure and Vibrational Frequencies of 3-Cyano-7-hydroxycoumarin by Density Functional Theory. Süleyman Demirel Üniversitesi Fen Bilimleri Enstitüsü Dergisi 21 3 767–773.
IEEE A. Sağlam, “Experimental and Theoretical Investigation of Molecular Structure and Vibrational Frequencies of 3-Cyano-7-hydroxycoumarin by Density Functional Theory”, Süleyman Demirel Üniv. Fen Bilim. Enst. Derg., c. 21, sy. 3, ss. 767–773, 2017, doi: 10.19113/sdufbed.09372.
ISNAD Sağlam, Adnan. “Experimental and Theoretical Investigation of Molecular Structure and Vibrational Frequencies of 3-Cyano-7-Hydroxycoumarin by Density Functional Theory”. Süleyman Demirel Üniversitesi Fen Bilimleri Enstitüsü Dergisi 21/3 (Aralık 2017), 767-773. https://doi.org/10.19113/sdufbed.09372.
JAMA Sağlam A. Experimental and Theoretical Investigation of Molecular Structure and Vibrational Frequencies of 3-Cyano-7-hydroxycoumarin by Density Functional Theory. Süleyman Demirel Üniv. Fen Bilim. Enst. Derg. 2017;21:767–773.
MLA Sağlam, Adnan. “Experimental and Theoretical Investigation of Molecular Structure and Vibrational Frequencies of 3-Cyano-7-Hydroxycoumarin by Density Functional Theory”. Süleyman Demirel Üniversitesi Fen Bilimleri Enstitüsü Dergisi, c. 21, sy. 3, 2017, ss. 767-73, doi:10.19113/sdufbed.09372.
Vancouver Sağlam A. Experimental and Theoretical Investigation of Molecular Structure and Vibrational Frequencies of 3-Cyano-7-hydroxycoumarin by Density Functional Theory. Süleyman Demirel Üniv. Fen Bilim. Enst. Derg. 2017;21(3):767-73.

e-ISSN :1308-6529
Linking ISSN (ISSN-L): 1300-7688

Dergide yayımlanan tüm makalelere ücretiz olarak erişilebilinir ve Creative Commons CC BY-NC Atıf-GayriTicari lisansı ile açık erişime sunulur. Tüm yazarlar ve diğer dergi kullanıcıları bu durumu kabul etmiş sayılırlar. CC BY-NC lisansı hakkında detaylı bilgiye erişmek için tıklayınız.