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An Approach based on Convolutional Neural Network and ACO-PSO for Colon Cancer Disease Diagnosis

Year 2024, EARLY VIEW, 1 - 1
https://doi.org/10.2339/politeknik.1419744

Abstract

The diagnosis of colon cancer has evolved into a global preoccupation, reflecting its profound impact on public health and healthcare systems worldwide. In this study, the diagnosis of colon cancer is performed using convolutional neural networks (CNN) and metaheuristic methods. Various CNN architectures, including GoogLeNet and ResNet-50, were employed to extract features related to colon disease. However, inaccuracies were introduced in both feature extraction and data classification due to the abundance of features. To address this issue, feature reduction techniques were implemented using combined Ant Colony Optimization (ACO) and particle swarm optimization (PSO). Superior convergence speed in optimizing the fitness function was observed in the case of ACO-PSO. With ResNet-50 producing 2048 features and GoogLeNet generating 1024 features, the reduction of feature dimensions proved to be crucial in identifying the most informative elements. Encouraging results were obtained in the evaluation of metrics, including sensitivity, specificity, accuracy, and F1 score, which were found to be 99.50%, 99.93%, 99.97%, and 99.97%, respectively.

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References

  • [1] A. Pulumati, A. Pulumati, B. S. Dwarakanath, A. Verma, and R. V. L. Papineni, “Technological advancements in cancer diagnostics: Improvements and limitations,” Cancer Rep., vol. 6, no. 2, p. e1764, (2023).
  • [2] D. Zhang, G. Huang, Q. Zhang, J. Han, J. Han, and Y. Yu, “Cross-modality deep feature learning for brain tumor segmentation,” Pattern Recognit., vol. 110, p. 107562, (2021).
  • [3] D. Bousis et al., “The role of deep learning in diagnosing colorectal cancer,” Gastroenterol. Rev. Gastroenterol., vol. 18, no. 1, (2023).
  • [4] J. Rahebi, “Fishier mantis optimiser: a swarm intelligence algorithm for clustering images of COVID-19 pandemic,” Int. J. Nanotechnol., vol. 20, no. 1–4, pp. 25–49, (2023).
  • [5] A. Ashraf, S. Naz, S. H. Shirazi, I. Razzak, and M. Parsad, “Deep transfer learning for alzheimer neurological disorder detection,” Multimed. Tools Appl., vol. 80, no. 20, pp. 30117–30142, (2021).
  • [6] M. Kekelidze, L. D’Errico, M. Pansini, A. Tyndall, and J. Hohmann, “Colorectal cancer: current imaging methods and future perspectives for the diagnosis, staging and therapeutic response evaluation,” World J. Gastroenterol. WJG, vol. 19, no. 46, p. 8502, (2013).
  • [7] O. A. Dara, J. M. Lopez-Guede, H. I. Raheem, J. Rahebi, E. Zulueta, and U. Fernandez-Gamiz, “Alzheimer’s Disease Diagnosis Using Machine Learning: A Survey,” Appl. Sci., vol. 13, no. 14, p. 8298, (2023).
  • [8] A. F. A. Iswisi, O. Karan, and J. Rahebi, “Diagnosis of Multiple Sclerosis Disease in Brain Magnetic Resonance Imaging Based on the Harris Hawks Optimization Algorithm,” Biomed Res. Int., vol. 2021, (2021).
  • [9] A. Mitsala, C. Tsalikidis, M. Pitiakoudis, C. Simopoulos, and A. K. Tsaroucha, “Artificial intelligence in colorectal cancer screening, diagnosis and treatment. A new era,” Curr. Oncol., vol. 28, no. 3, pp. 1581–1607, (2021).
  • [10] J. Burggraaff et al., “Manual and automated tissue segmentation confirm the impact of thalamus atrophy on cognition in multiple sclerosis: A multicenter study,” NeuroImage Clin., vol. 29, p. 102549, (2021).
  • [11] K. Reinhart, M. Bauer, N. C. Riedemann, and C. S. Hartog, “New approaches to sepsis: molecular diagnostics and biomarkers,” Clin. Microbiol. Rev., vol. 25, no. 4, pp. 609–634, (2012).
  • [12] Y. Gonzalez et al., “Semi-automatic sigmoid colon segmentation in CT for radiation therapy treatment planning via an iterative 2.5-D deep learning approach,” Med. Image Anal., vol. 68, p. 101896, (2021).
  • [13] M. Lawler et al., “Critical research gaps and recommendations to inform research prioritisation for more effective prevention and improved outcomes in colorectal cancer,” Gut, vol. 67, no. 1, pp. 179–193, (2018).
  • [14] A. A. A. Mohamed, A. Hançerlioğullari, J. Rahebi, M. K. Ray, and S. Roy, “Colon Disease Diagnosis with Convolutional Neural Network and Grasshopper Optimization Algorithm,” Diagnostics, vol. 13, no. 10, p. 1728, (2023).
  • [15] Y. Jiang and Y. Ma, “Application of hybrid particle swarm and ant colony optimization algorithms to obtain the optimum homomorphic wavelet image fusion: Introduction,” Ann. Transl. Med., vol. 8, no. 22, (2020).
  • [16] Y. Shang et al., “Pharmaceutical immunoglobulin G impairs anti-carcinoma activity of oxaliplatin in colon cancer cells,” Br. J. Cancer, vol. 124, no. 8, pp. 1411–1420, (2021).
  • [17] K. S. Litvinova, I. E. Rafailov, A. V Dunaev, S. G. Sokolovski, and E. U. Rafailov, “Non-invasive biomedical research and diagnostics enabled by innovative compact lasers,” Prog. Quantum Electron., vol. 56, pp. 1–14, (2017).
  • [18] L. Zhang et al., “Single-cell analyses inform mechanisms of myeloid-targeted therapies in colon cancer,” Cell, vol. 181, no. 2, pp. 442–459, (2020).
  • [19] M. S. Kwak et al., “Deep convolutional neural network-based lymph node metastasis prediction for colon cancer using histopathological images,” Front. Oncol., vol. 10, p. 619803, (2021).
  • [20] F. Grass et al., “Impact of delay to surgery on survival in stage I-III colon cancer,” Eur. J. Surg. Oncol., vol. 46, no. 3, pp. 455–461, (2020).
  • [21] T. Niknam and B. Amiri, “An efficient hybrid approach based on PSO, ACO and k-means for cluster analysis,” Appl. Soft Comput., vol. 10, no. 1, pp. 183–197, (2010).
  • [22] N. A. Javan, A. Jebreili, B. Mozafari, and M. Hosseinioun, “Classification and Segmentation of Pulmonary Lesions in CT images using a combined VGG-XGBoost method, and an integrated Fuzzy Clustering-Level Set technique,” arXiv Prepr. arXiv2101.00948, (2021).
  • [23] K. M. D. Dawod, “A new method based CNN combined with genetic algorithm and support vector machine for COVID-19 detection by analyzing X-ray images.” Altınbaş Üniversitesi/Lisansüstü Eğitim Enstitüsü, (2022).
  • [24] P. Achilli et al., “Survival impact of adjuvant chemotherapy in patients with stage IIA colon cancer: analysis of the National Cancer Database,” Int. J. Cancer, vol. 148, no. 1, pp. 161–169, (2021).
  • [25] M. Sedlmair, M. Meyer, and T. Munzner, “Design study methodology: Reflections from the trenches and the stacks,” IEEE Trans. Vis. Comput. Graph., vol. 18, no. 12, pp. 2431–2440, (2012).
  • [26] S. Ahmed, M. Frikha, T. D. H. Hussein, and J. Rahebi, “Face Recognition System using Histograms of Oriented Gradients and Convolutional Neural Network based on with Particle Swarm Optimization,” in 2021 International Conference on Electrical, Communication, and Computer Engineering (ICECCE), pp. 1–5., (2021).
  • [27] S. Ahmed, M. Frikha, T. D. H. Hussein, and J. Rahebi, “Optimum Feature Selection with Particle Swarm Optimization to Face Recognition System Using Gabor Wavelet Transform and Deep Learning,” Biomed Res. Int., vol. 2021, (2021).
  • [28] M. Dorigo, M. Birattari, and T. Stutzle, “Ant colony optimization,” IEEE Comput. Intell. Mag., vol. 1, no. 4, pp. 28–39, (2006).
  • [29] H. R. Kanan, K. Faez, and S. M. Taheri, “Feature selection using ant colony optimization (ACO): a new method and comparative study in the application of face recognition system,” in Industrial conference on data mining, pp. 63–76, (2007).
  • [30] L. Yu and H. Liu, “Efficient feature selection via analysis of relevance and redundancy,” J. Mach. Learn. Res., vol. 5, pp. 1205–1224, (2004).
  • [31] S. Tabakhi, P. Moradi, and F. Akhlaghian, “An unsupervised feature selection algorithm based on ant colony optimization,” Eng. Appl. Artif. Intell., vol. 32, pp. 112–123, (2014).
  • [32] V. Fernandez-Viagas, R. Ruiz, and J. M. Framinan, “A new vision of approximate methods for the permutation flowshop to minimise makespan: State-of-the-art and computational evaluation,” Eur. J. Oper. Res., vol. 257, no. 3, pp. 707–721, (2017).
  • [33] G. Beni, “Swarm intelligence,” Complex Soc. Behav. Syst. Game Theory Agent-Based Model., pp. 791–818, (2020).
  • [34] B. H. Nguyen, B. Xue, and M. Zhang, “A survey on swarm intelligence approaches to feature selection in data mining,” Swarm Evol. Comput., vol. 54, p. 100663, (2020).
  • [35] W. K. T. Cho, “An evolutionary algorithm for subset selection in causal inference models,” J. Oper. Res. Soc., pp. 1–15, (2017).
  • [36] A. A. Amponsah, F. Han, Q.-H. Ling, and P. K. Kudjo, “An enhanced class topper algorithm based on particle swarm optimizer for global optimization,” Appl. Intell., vol. 51, pp. 1022–1040, (2021).
  • [37] R. Hassan, B. Cohanim, O. De Weck, and G. Venter, “A comparison of particle swarm optimization and the genetic algorithm,” in 46th AIAA/ASME/ASCE/AHS/ASC structures, structural dynamics and materials conference, 2005, p. (1897).
  • [38] J. Too, A. R. Abdullah, and N. Mohd Saad, “A new co-evolution binary particle swarm optimization with multiple inertia weight strategy for feature selection,” in Informatics, vol. 6, no. 2, p. 21, (2019).
  • [39] A. A. Borkowski, M. M. Bui, L. B. Thomas, C. P. Wilson, L. A. DeLand, and S. M. Mastorides, “Lung and colon cancer histopathological image dataset (lc25000),” arXiv Prepr. arXiv1912.12142, (2019).

An Approach based on Convolutional Neural Network and ACO-PSO for Colon Cancer Disease Diagnosis

Year 2024, EARLY VIEW, 1 - 1
https://doi.org/10.2339/politeknik.1419744

Abstract

The diagnosis of colon cancer has evolved into a global preoccupation, reflecting its profound impact on public health and healthcare systems worldwide. In this study, the diagnosis of colon cancer is performed using convolutional neural networks (CNN) and metaheuristic methods. Various CNN architectures, including GoogLeNet and ResNet-50, were employed to extract features related to colon disease. However, inaccuracies were introduced in both feature extraction and data classification due to the abundance of features. To address this issue, feature reduction techniques were implemented using combined Ant Colony Optimization (ACO) and particle swarm optimization (PSO). Superior convergence speed in optimizing the fitness function was observed in the case of ACO-PSO. With ResNet-50 producing 2048 features and GoogLeNet generating 1024 features, the reduction of feature dimensions proved to be crucial in identifying the most informative elements. Encouraging results were obtained in the evaluation of metrics, including sensitivity, specificity, accuracy, and F1 score, which were found to be 99.50%, 99.93%, 99.97%, and 99.97%, respectively.

References

  • [1] A. Pulumati, A. Pulumati, B. S. Dwarakanath, A. Verma, and R. V. L. Papineni, “Technological advancements in cancer diagnostics: Improvements and limitations,” Cancer Rep., vol. 6, no. 2, p. e1764, (2023).
  • [2] D. Zhang, G. Huang, Q. Zhang, J. Han, J. Han, and Y. Yu, “Cross-modality deep feature learning for brain tumor segmentation,” Pattern Recognit., vol. 110, p. 107562, (2021).
  • [3] D. Bousis et al., “The role of deep learning in diagnosing colorectal cancer,” Gastroenterol. Rev. Gastroenterol., vol. 18, no. 1, (2023).
  • [4] J. Rahebi, “Fishier mantis optimiser: a swarm intelligence algorithm for clustering images of COVID-19 pandemic,” Int. J. Nanotechnol., vol. 20, no. 1–4, pp. 25–49, (2023).
  • [5] A. Ashraf, S. Naz, S. H. Shirazi, I. Razzak, and M. Parsad, “Deep transfer learning for alzheimer neurological disorder detection,” Multimed. Tools Appl., vol. 80, no. 20, pp. 30117–30142, (2021).
  • [6] M. Kekelidze, L. D’Errico, M. Pansini, A. Tyndall, and J. Hohmann, “Colorectal cancer: current imaging methods and future perspectives for the diagnosis, staging and therapeutic response evaluation,” World J. Gastroenterol. WJG, vol. 19, no. 46, p. 8502, (2013).
  • [7] O. A. Dara, J. M. Lopez-Guede, H. I. Raheem, J. Rahebi, E. Zulueta, and U. Fernandez-Gamiz, “Alzheimer’s Disease Diagnosis Using Machine Learning: A Survey,” Appl. Sci., vol. 13, no. 14, p. 8298, (2023).
  • [8] A. F. A. Iswisi, O. Karan, and J. Rahebi, “Diagnosis of Multiple Sclerosis Disease in Brain Magnetic Resonance Imaging Based on the Harris Hawks Optimization Algorithm,” Biomed Res. Int., vol. 2021, (2021).
  • [9] A. Mitsala, C. Tsalikidis, M. Pitiakoudis, C. Simopoulos, and A. K. Tsaroucha, “Artificial intelligence in colorectal cancer screening, diagnosis and treatment. A new era,” Curr. Oncol., vol. 28, no. 3, pp. 1581–1607, (2021).
  • [10] J. Burggraaff et al., “Manual and automated tissue segmentation confirm the impact of thalamus atrophy on cognition in multiple sclerosis: A multicenter study,” NeuroImage Clin., vol. 29, p. 102549, (2021).
  • [11] K. Reinhart, M. Bauer, N. C. Riedemann, and C. S. Hartog, “New approaches to sepsis: molecular diagnostics and biomarkers,” Clin. Microbiol. Rev., vol. 25, no. 4, pp. 609–634, (2012).
  • [12] Y. Gonzalez et al., “Semi-automatic sigmoid colon segmentation in CT for radiation therapy treatment planning via an iterative 2.5-D deep learning approach,” Med. Image Anal., vol. 68, p. 101896, (2021).
  • [13] M. Lawler et al., “Critical research gaps and recommendations to inform research prioritisation for more effective prevention and improved outcomes in colorectal cancer,” Gut, vol. 67, no. 1, pp. 179–193, (2018).
  • [14] A. A. A. Mohamed, A. Hançerlioğullari, J. Rahebi, M. K. Ray, and S. Roy, “Colon Disease Diagnosis with Convolutional Neural Network and Grasshopper Optimization Algorithm,” Diagnostics, vol. 13, no. 10, p. 1728, (2023).
  • [15] Y. Jiang and Y. Ma, “Application of hybrid particle swarm and ant colony optimization algorithms to obtain the optimum homomorphic wavelet image fusion: Introduction,” Ann. Transl. Med., vol. 8, no. 22, (2020).
  • [16] Y. Shang et al., “Pharmaceutical immunoglobulin G impairs anti-carcinoma activity of oxaliplatin in colon cancer cells,” Br. J. Cancer, vol. 124, no. 8, pp. 1411–1420, (2021).
  • [17] K. S. Litvinova, I. E. Rafailov, A. V Dunaev, S. G. Sokolovski, and E. U. Rafailov, “Non-invasive biomedical research and diagnostics enabled by innovative compact lasers,” Prog. Quantum Electron., vol. 56, pp. 1–14, (2017).
  • [18] L. Zhang et al., “Single-cell analyses inform mechanisms of myeloid-targeted therapies in colon cancer,” Cell, vol. 181, no. 2, pp. 442–459, (2020).
  • [19] M. S. Kwak et al., “Deep convolutional neural network-based lymph node metastasis prediction for colon cancer using histopathological images,” Front. Oncol., vol. 10, p. 619803, (2021).
  • [20] F. Grass et al., “Impact of delay to surgery on survival in stage I-III colon cancer,” Eur. J. Surg. Oncol., vol. 46, no. 3, pp. 455–461, (2020).
  • [21] T. Niknam and B. Amiri, “An efficient hybrid approach based on PSO, ACO and k-means for cluster analysis,” Appl. Soft Comput., vol. 10, no. 1, pp. 183–197, (2010).
  • [22] N. A. Javan, A. Jebreili, B. Mozafari, and M. Hosseinioun, “Classification and Segmentation of Pulmonary Lesions in CT images using a combined VGG-XGBoost method, and an integrated Fuzzy Clustering-Level Set technique,” arXiv Prepr. arXiv2101.00948, (2021).
  • [23] K. M. D. Dawod, “A new method based CNN combined with genetic algorithm and support vector machine for COVID-19 detection by analyzing X-ray images.” Altınbaş Üniversitesi/Lisansüstü Eğitim Enstitüsü, (2022).
  • [24] P. Achilli et al., “Survival impact of adjuvant chemotherapy in patients with stage IIA colon cancer: analysis of the National Cancer Database,” Int. J. Cancer, vol. 148, no. 1, pp. 161–169, (2021).
  • [25] M. Sedlmair, M. Meyer, and T. Munzner, “Design study methodology: Reflections from the trenches and the stacks,” IEEE Trans. Vis. Comput. Graph., vol. 18, no. 12, pp. 2431–2440, (2012).
  • [26] S. Ahmed, M. Frikha, T. D. H. Hussein, and J. Rahebi, “Face Recognition System using Histograms of Oriented Gradients and Convolutional Neural Network based on with Particle Swarm Optimization,” in 2021 International Conference on Electrical, Communication, and Computer Engineering (ICECCE), pp. 1–5., (2021).
  • [27] S. Ahmed, M. Frikha, T. D. H. Hussein, and J. Rahebi, “Optimum Feature Selection with Particle Swarm Optimization to Face Recognition System Using Gabor Wavelet Transform and Deep Learning,” Biomed Res. Int., vol. 2021, (2021).
  • [28] M. Dorigo, M. Birattari, and T. Stutzle, “Ant colony optimization,” IEEE Comput. Intell. Mag., vol. 1, no. 4, pp. 28–39, (2006).
  • [29] H. R. Kanan, K. Faez, and S. M. Taheri, “Feature selection using ant colony optimization (ACO): a new method and comparative study in the application of face recognition system,” in Industrial conference on data mining, pp. 63–76, (2007).
  • [30] L. Yu and H. Liu, “Efficient feature selection via analysis of relevance and redundancy,” J. Mach. Learn. Res., vol. 5, pp. 1205–1224, (2004).
  • [31] S. Tabakhi, P. Moradi, and F. Akhlaghian, “An unsupervised feature selection algorithm based on ant colony optimization,” Eng. Appl. Artif. Intell., vol. 32, pp. 112–123, (2014).
  • [32] V. Fernandez-Viagas, R. Ruiz, and J. M. Framinan, “A new vision of approximate methods for the permutation flowshop to minimise makespan: State-of-the-art and computational evaluation,” Eur. J. Oper. Res., vol. 257, no. 3, pp. 707–721, (2017).
  • [33] G. Beni, “Swarm intelligence,” Complex Soc. Behav. Syst. Game Theory Agent-Based Model., pp. 791–818, (2020).
  • [34] B. H. Nguyen, B. Xue, and M. Zhang, “A survey on swarm intelligence approaches to feature selection in data mining,” Swarm Evol. Comput., vol. 54, p. 100663, (2020).
  • [35] W. K. T. Cho, “An evolutionary algorithm for subset selection in causal inference models,” J. Oper. Res. Soc., pp. 1–15, (2017).
  • [36] A. A. Amponsah, F. Han, Q.-H. Ling, and P. K. Kudjo, “An enhanced class topper algorithm based on particle swarm optimizer for global optimization,” Appl. Intell., vol. 51, pp. 1022–1040, (2021).
  • [37] R. Hassan, B. Cohanim, O. De Weck, and G. Venter, “A comparison of particle swarm optimization and the genetic algorithm,” in 46th AIAA/ASME/ASCE/AHS/ASC structures, structural dynamics and materials conference, 2005, p. (1897).
  • [38] J. Too, A. R. Abdullah, and N. Mohd Saad, “A new co-evolution binary particle swarm optimization with multiple inertia weight strategy for feature selection,” in Informatics, vol. 6, no. 2, p. 21, (2019).
  • [39] A. A. Borkowski, M. M. Bui, L. B. Thomas, C. P. Wilson, L. A. DeLand, and S. M. Mastorides, “Lung and colon cancer histopathological image dataset (lc25000),” arXiv Prepr. arXiv1912.12142, (2019).
There are 39 citations in total.

Details

Primary Language English
Subjects Deep Learning
Journal Section Research Article
Authors

Amna Ali A. Mohamed 0000-0001-8344-6937

Melisa Rahebi 0009-0002-9607-4540

Aybaba Hançerlioğulları 0000-0002-9830-4226

Javad Rahebi 0000-0001-9875-4860

Early Pub Date September 4, 2024
Publication Date
Submission Date January 14, 2024
Acceptance Date April 25, 2024
Published in Issue Year 2024 EARLY VIEW

Cite

APA Ali A. Mohamed, A., Rahebi, M., Hançerlioğulları, A., Rahebi, J. (2024). An Approach based on Convolutional Neural Network and ACO-PSO for Colon Cancer Disease Diagnosis. Politeknik Dergisi1-1. https://doi.org/10.2339/politeknik.1419744
AMA Ali A. Mohamed A, Rahebi M, Hançerlioğulları A, Rahebi J. An Approach based on Convolutional Neural Network and ACO-PSO for Colon Cancer Disease Diagnosis. Politeknik Dergisi. Published online September 1, 2024:1-1. doi:10.2339/politeknik.1419744
Chicago Ali A. Mohamed, Amna, Melisa Rahebi, Aybaba Hançerlioğulları, and Javad Rahebi. “An Approach Based on Convolutional Neural Network and ACO-PSO for Colon Cancer Disease Diagnosis”. Politeknik Dergisi, September (September 2024), 1-1. https://doi.org/10.2339/politeknik.1419744.
EndNote Ali A. Mohamed A, Rahebi M, Hançerlioğulları A, Rahebi J (September 1, 2024) An Approach based on Convolutional Neural Network and ACO-PSO for Colon Cancer Disease Diagnosis. Politeknik Dergisi 1–1.
IEEE A. Ali A. Mohamed, M. Rahebi, A. Hançerlioğulları, and J. Rahebi, “An Approach based on Convolutional Neural Network and ACO-PSO for Colon Cancer Disease Diagnosis”, Politeknik Dergisi, pp. 1–1, September 2024, doi: 10.2339/politeknik.1419744.
ISNAD Ali A. Mohamed, Amna et al. “An Approach Based on Convolutional Neural Network and ACO-PSO for Colon Cancer Disease Diagnosis”. Politeknik Dergisi. September 2024. 1-1. https://doi.org/10.2339/politeknik.1419744.
JAMA Ali A. Mohamed A, Rahebi M, Hançerlioğulları A, Rahebi J. An Approach based on Convolutional Neural Network and ACO-PSO for Colon Cancer Disease Diagnosis. Politeknik Dergisi. 2024;:1–1.
MLA Ali A. Mohamed, Amna et al. “An Approach Based on Convolutional Neural Network and ACO-PSO for Colon Cancer Disease Diagnosis”. Politeknik Dergisi, 2024, pp. 1-1, doi:10.2339/politeknik.1419744.
Vancouver Ali A. Mohamed A, Rahebi M, Hançerlioğulları A, Rahebi J. An Approach based on Convolutional Neural Network and ACO-PSO for Colon Cancer Disease Diagnosis. Politeknik Dergisi. 2024:1-.