Yetiştiriciliği Yapılan Bazı Türk Kişniş (Coriandrum Sativum L.) Çeşitlerinde Genetik Çeşitliliğin ISSR ve SRAP Marköleri Yardımıyla Değerlendirilmesi
Year 2017,
Volume: 27 Issue: 2, 245 - 251, 30.06.2017
M. Alp Furan
,
Merve Dilek Geboloğlu
Abstract
Coriandrum sativum L., Umbelliferae / Apiaceae ailesine ait
uçucu yağ dahil olmak üzere tıbbi bitki olarak kullanılan bir baharat
bitkisidir. Farklı kısımlarındaki çeşitli kimyasal bileşenleri, antibakteriyel,
antifungal ve antioksidatif olarak kullanışlıdır. Dolayısıyla gıdaların
bozulmasını önleyerek raf ömrünün uzatılmasında önemli bir rol oynamaktadır. Kişnişin yaprak ve tohumları çoğunlukla
geleneksel tedavide kullanılır ve uçucu yağları insanlar için toksik olmaması
nedeniyle farmasötik ürünler ve parfüm bileşenlerinde yer alır. Kişniş, moleküler olarak yeterince tanımlanmamıştır. Kişniş ıslah çalışmalarıyla genetik olarak
tek düze Coriandrum sativum L
çeşitlerine ulaşılabilecektir. Kabul edilebilir Genotipler, germplazmdaki
genetik değişkenlik miktarıyla belirlenir ve kişniş için kullanılabilir
bilgiler sınırlıdır. Genetik
farklılığının belirlenmesinin çalışılması ve ıslah programlarında uygun genotip
kullanımının öneminin vurgulanması, kişnişteki genetik tabanı genişletmek için
gereklidir. Bu çalışmada; bazı Türk kişniş çeşitleri
arasındaki genetik varyasyonlar iki farklı markör tekniği kullanılarak (ISSR ve
SRAP) DNA düzeyinde araştırılmış ve ticareti yapılan bu çeşitler arasındaki
genetik ilişkinin belirlenmesi amaçlanmıştır. Her iki primer toplam 473
skorlanabilir bant vermiş ve her markörden elde edilen sonuçlar genotipler
arasındaki filogenetik ilişkileri göstermiştir.
References
- Agarwal M, Shrivastava N, Padh H (2008) molecular marker techniques and their applications in plant sciences. Plant Cell Reports 27: 617–631.
- Coskuner Y, Karababa E (2007) Physical properties of coriander seeds (Coriandrum sativum L.). J Food Eng. 80: 408-16.
- Diederichsen A (1996) Coriander (Coriandrum sativum L.). Promoting the conservation and use of underutilized and neglected crops. 3. Institute of Plant Genetics and
Crop Plant Research, Gatersleben/ International Plant Genetic Resources Institute, Rome. ISBN 92-9043-284-5
- Doyle J. J, Doyle J.L (1987) A rapid dna isolation procedure for small quantities of fesh leaf tissues. Phytochemical Bulletin 19 (1):11-15.
- Ebert K (1982) Arznei- und Gewürzpflanzen - Ein Leitfaden für Anbau und Sammlung 2. Auflage Wissenschaftliche Verlagsgesellschaft mbH, Stuttgart.
- Godwin D, Aitken E. A. B. and Smith L. W (1997) Application of inter simple sequence repeat (ISSR) markers to plant genetics. Electrophoresis 18: 1524-1528.
- Ivanova K.V, Stoletova V (1990) The history of culture and intraspecific taxonomy of Coriandrum sativum L. [in Russ., Eng. abstr.]. Sb. nau n. tr. prikl. bot., gen. i sel. 133:26-40.
- Jaccard P (1908) Novelles recherches sur la distribution florale. Bull Soc Vaud Sci Nat 44:223–270
- Kalemba D, Kunicka A (2003) Antibacterial and antifungal properties of essential oils. Curr Med Chem 10: 813-29.
- Li G, Quiros C. F (2001) Sequence-related amplified polymorphism (SRAP),
a new marker system based on a simple PCR reaction: its application to mapping and gene tagging in Brassica. Theor Appl Genet (2001) 103:455–461
- Li G, McVetty P. B. E, Quiros C. F (2013) SRAP Molecular Marker Technology in Plant Science Plant Breeding From Laboratories to Fields http://dx.doi.org/10.5772/54511
- Li H (1969) The vegetables of ancient China. Econ. Bot. 23:253-260.
- Luk’janov I.A, Reznikov A.R (1976) Coriander [in Russ.]. Pp. 9-57 in Efirnomaslicnye kyl’tury. (A.M. Smoljanova and A.T. Ksendza, eds.). Kolos, Moskva.
Mandal S, Mandal M (2015) Coriander (Coriandrum sativum L.) essential oil: Chemistry and biological activity. Asian Pacific Journal of Tropical Biomedicine. 5(6): 421-428
- Nei M, Li WH (1979) Mathematical-model for studying genetic-variation in terms of restriction endonucleases. Proc Natl Acad Sci USA 76:5269–5273. doi:10.1073/pnas. 76.10.5269
- Prakash V (1990) Leafy Spices. CRC Press Inc., Boca Raton. Pp. 31-32.
- Purseglove J.W, Brown E.G, Green C.L, Robbins S.R.J. (1981) Spices. Vol. 2. Longman, London. Pp. 736-788.
- Robarts. D. W. H, Wolf A. D. (2014) Sequence-Related Amplified Polymorphism (Srap) Markers: A Potential Resource For Studies In Plant Molecular Biology Applications in Plant Sciences 2014 2(7): 1400017
- Riek J.D, Calsyn E, Everaert I, Bockstaele E.V, Loose M.D (2001) AFLP based alternatives for the assessment of distinctness, uniformity and stability of sugar beet varieties. Theo. Appl. Genet. 103:1254 1265.
- Singh S.P, Katiyar R.S, Rai S.K, Tripathi S.M, Srivastva J.P (2005) Genetic divergence and its implication in breeding of desired plant type in coriander (coriandrum sativum l.). Genetika. Vol. 37, No. 2, 155-163.
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- Weir BS (1990) Genetics data analysis: methods for discrete population genetic data. Sinaur Associates, Sunderland
- Zietkiewicz, E., Rafalski A, Labuda D (1994) Genome fingerprinting by simple sequence repeat (SSR) anchored polymerase chain reaction amplification. Genomics 20: 176–18
Assessment of Genetic Variation on Some Cultivated Turkish Coriander (Coriandrum Sativum L.) Varieties Based on ISSR and SRAP Markers
Year 2017,
Volume: 27 Issue: 2, 245 - 251, 30.06.2017
M. Alp Furan
,
Merve Dilek Geboloğlu
Abstract
Coriandrum sativum L. is the spices plant that used as medicinal plant including essential
oil, belonging to the family Umbelliferae/Apiaceae.
Its various chemical components in different parts are useful as antibacterial,
antifungal and antioxidative. Therefore plays a major role in preserving the
shelf life of foods by preventing their spoilage. Leaves and seeds of coriander
mostly used in folk medicine and its essential oil used for pharmaceutical
products and as an ingredient in perfumes cause of non-toxic to humans.
Coriander is not much defined as molecularly. Coriander breeding studies will
probably result in more or less genetically identical varieties of Coriandrum sativum L. The acceptability
of the genotypes is determined by the amount of genetic variability in the
germplasm and the utilizable information is limited in coriander. Studying to
determine the genetic diversity of identified characters and emphasis of
importance to use convenient genotype in a breeding program is needed in order
to enlarge the genetic base in coriander. In this study; Genetic variations
among some Turkish coriander varieties were investigated at the DNA level using
two different marker techniques (ISSR and SRAP) and the aim was to determine
the genetic relationship between these traded varieties. Both primers gave
totally 473 scorable bands and all results from each marker have shown the
phylogenetic relationships between genotypes.
References
- Agarwal M, Shrivastava N, Padh H (2008) molecular marker techniques and their applications in plant sciences. Plant Cell Reports 27: 617–631.
- Coskuner Y, Karababa E (2007) Physical properties of coriander seeds (Coriandrum sativum L.). J Food Eng. 80: 408-16.
- Diederichsen A (1996) Coriander (Coriandrum sativum L.). Promoting the conservation and use of underutilized and neglected crops. 3. Institute of Plant Genetics and
Crop Plant Research, Gatersleben/ International Plant Genetic Resources Institute, Rome. ISBN 92-9043-284-5
- Doyle J. J, Doyle J.L (1987) A rapid dna isolation procedure for small quantities of fesh leaf tissues. Phytochemical Bulletin 19 (1):11-15.
- Ebert K (1982) Arznei- und Gewürzpflanzen - Ein Leitfaden für Anbau und Sammlung 2. Auflage Wissenschaftliche Verlagsgesellschaft mbH, Stuttgart.
- Godwin D, Aitken E. A. B. and Smith L. W (1997) Application of inter simple sequence repeat (ISSR) markers to plant genetics. Electrophoresis 18: 1524-1528.
- Ivanova K.V, Stoletova V (1990) The history of culture and intraspecific taxonomy of Coriandrum sativum L. [in Russ., Eng. abstr.]. Sb. nau n. tr. prikl. bot., gen. i sel. 133:26-40.
- Jaccard P (1908) Novelles recherches sur la distribution florale. Bull Soc Vaud Sci Nat 44:223–270
- Kalemba D, Kunicka A (2003) Antibacterial and antifungal properties of essential oils. Curr Med Chem 10: 813-29.
- Li G, Quiros C. F (2001) Sequence-related amplified polymorphism (SRAP),
a new marker system based on a simple PCR reaction: its application to mapping and gene tagging in Brassica. Theor Appl Genet (2001) 103:455–461
- Li G, McVetty P. B. E, Quiros C. F (2013) SRAP Molecular Marker Technology in Plant Science Plant Breeding From Laboratories to Fields http://dx.doi.org/10.5772/54511
- Li H (1969) The vegetables of ancient China. Econ. Bot. 23:253-260.
- Luk’janov I.A, Reznikov A.R (1976) Coriander [in Russ.]. Pp. 9-57 in Efirnomaslicnye kyl’tury. (A.M. Smoljanova and A.T. Ksendza, eds.). Kolos, Moskva.
Mandal S, Mandal M (2015) Coriander (Coriandrum sativum L.) essential oil: Chemistry and biological activity. Asian Pacific Journal of Tropical Biomedicine. 5(6): 421-428
- Nei M, Li WH (1979) Mathematical-model for studying genetic-variation in terms of restriction endonucleases. Proc Natl Acad Sci USA 76:5269–5273. doi:10.1073/pnas. 76.10.5269
- Prakash V (1990) Leafy Spices. CRC Press Inc., Boca Raton. Pp. 31-32.
- Purseglove J.W, Brown E.G, Green C.L, Robbins S.R.J. (1981) Spices. Vol. 2. Longman, London. Pp. 736-788.
- Robarts. D. W. H, Wolf A. D. (2014) Sequence-Related Amplified Polymorphism (Srap) Markers: A Potential Resource For Studies In Plant Molecular Biology Applications in Plant Sciences 2014 2(7): 1400017
- Riek J.D, Calsyn E, Everaert I, Bockstaele E.V, Loose M.D (2001) AFLP based alternatives for the assessment of distinctness, uniformity and stability of sugar beet varieties. Theo. Appl. Genet. 103:1254 1265.
- Singh S.P, Katiyar R.S, Rai S.K, Tripathi S.M, Srivastva J.P (2005) Genetic divergence and its implication in breeding of desired plant type in coriander (coriandrum sativum l.). Genetika. Vol. 37, No. 2, 155-163.
- SPSS Inc., 2001. SPSS 11.0 for Windows, USA, Inc. (http://www.spss.com).
- Vos, P., Hogers R, Bleeker M, Reijans M, Lee T, Hornes M, Zabeau M (1995) AFLP: A new technique for DNA fingerprinting. Nucleic Acids Research 23: 4407–4414.
- Weir BS (1990) Genetics data analysis: methods for discrete population genetic data. Sinaur Associates, Sunderland
- Zietkiewicz, E., Rafalski A, Labuda D (1994) Genome fingerprinting by simple sequence repeat (SSR) anchored polymerase chain reaction amplification. Genomics 20: 176–18